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BUILD report for lol on malbec2

This page was generated on 2020-10-17 11:55:02 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE lol PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 952/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lol 1.36.0
Yinyin Yuan
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/lol
Branch: RELEASE_3_11
Last Commit: 37be877
Last Changed Date: 2020-04-27 14:25:12 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: lol
Version: 1.36.0
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data lol
StartedAt: 2020-10-16 20:04:29 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 20:04:38 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 9.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data lol
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* checking for file ‘lol/DESCRIPTION’ ... OK
* preparing ‘lol’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘lol.Rnw’ using Sweave
Loading required package: penalized
Loading required package: survival
Welcome to penalized. For extended examples, see vignette("penalized").
Loading required package: Matrix
Warning: Package 'lol' is deprecated and will be removed from Bioconductor
  version 3.12

Error: processing vignette 'lol.Rnw' failed with diagnostics:
 chunk 4 
Error in UseMethod("lasso") : 
  no applicable method for 'lasso' applied to an object of class "cv"

--- failed re-building ‘lol.Rnw’

SUMMARY: processing the following file failed:
  ‘lol.Rnw’

Error: Vignette re-building failed.
Execution halted