Qianxing Mo
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/iSeq |
| Branch: RELEASE_3_11 |
| Last Commit: 8f2db5d |
| Last Changed Date: 2020-04-27 14:23:11 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:54 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE iSeq PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 897/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| iSeq 1.40.0 Qianxing Mo
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: iSeq |
| Version: 1.40.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/iSeq_1.40.0.tar.gz && rm -rf iSeq.buildbin-libdir && mkdir iSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iSeq.buildbin-libdir iSeq_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL iSeq_1.40.0.zip && rm iSeq_1.40.0.tar.gz iSeq_1.40.0.zip |
| StartedAt: 2020-10-16 16:43:41 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 16:46:42 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 180.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/iSeq_1.40.0.tar.gz && rm -rf iSeq.buildbin-libdir && mkdir iSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iSeq.buildbin-libdir iSeq_1.40.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL iSeq_1.40.0.zip && rm iSeq_1.40.0.tar.gz iSeq_1.40.0.zip
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100 1251k 100 1251k 0 0 867k 0 0:00:01 0:00:01 --:--:-- 874k
install for i386
* installing *source* package 'iSeq' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c iSeq.c -o iSeq.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o iSeq.dll tmp.def iSeq.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/iSeq.buildbin-libdir/00LOCK-iSeq/00new/iSeq/libs/i386
** R
** data
*** moving datasets to lazyload DB
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'iSeq'
finding HTML links ... done
iSeq1 html
iSeq2 html
mergetag html
nrsf html
peakreg html
plotreg html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'iSeq' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c iSeq.c -o iSeq.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o iSeq.dll tmp.def iSeq.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iSeq' as iSeq_1.40.0.zip
* DONE (iSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'iSeq' successfully unpacked and MD5 sums checked