| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:58:38 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE graper PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 770/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| graper 1.4.0 Britta Velten
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | [ OK ] | OK |
| Package: graper |
| Version: 1.4.0 |
| Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings graper_1.4.0.tar.gz |
| StartedAt: 2020-10-17 01:49:28 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 01:50:53 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 85.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings graper_1.4.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.11-bioc/meat/graper.Rcheck’ * using R version 4.0.3 (2020-10-10) * using platform: x86_64-apple-darwin17.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘graper/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘graper’ version ‘1.4.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘graper’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... NOTE Note: information on .o files is not available * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.11-bioc/meat/graper.Rcheck/00check.log’ for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library’ * installing *source* package ‘graper’ ... ** using staged installation ** libs clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/BH/include' -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/BH/include' -I/usr/local/include -fPIC -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -mmacosx-version-min=10.13 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.0/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin17.0 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-830.764
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.071
ELB improved by 261.693
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.553
ELB improved by 61.5178
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.256
ELB improved by 46.2977
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.027
ELB improved by 21.2281
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.686
ELB improved by 8.34097
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.625
ELB improved by 5.06164
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.293
ELB improved by 4.33149
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.806
ELB improved by 4.48751
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.786
ELB improved by 5.02026
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.217
ELB improved by 5.56896
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.557
ELB improved by 5.65967
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.633
ELB improved by 4.92375
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.048
ELB improved by 3.58493
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.754
ELB improved by 2.29408
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.327
ELB improved by 1.42675
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.387
ELB improved by 0.940656
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.708
ELB improved by 0.678585
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.177
ELB improved by 0.531389
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.733
ELB improved by 0.443885
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.343
ELB improved by 0.389423
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.989
ELB improved by 0.354124
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.659
ELB improved by 0.330259
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.346
ELB improved by 0.313553
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.044
ELB improved by 0.301876
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.749
ELB improved by 0.294466
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.458
ELB improved by 0.291256
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.166
ELB improved by 0.291963
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.871
ELB improved by 0.294814
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.575
ELB improved by 0.295965
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.283
ELB improved by 0.291729
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.001
ELB improved by 0.282269
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.73
ELB improved by 0.271199
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.468
ELB improved by 0.261723
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.213
ELB improved by 0.255066
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.962
ELB improved by 0.251332
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.711
ELB improved by 0.250374
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.459
ELB improved by 0.252028
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.204
ELB improved by 0.255949
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.942
ELB improved by 0.261132
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.677
ELB improved by 0.265281
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.412
ELB improved by 0.264842
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.155
ELB improved by 0.256919
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.913
ELB improved by 0.241919
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.69
ELB improved by 0.223198
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.486
ELB improved by 0.204004
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.3
ELB improved by 0.185845
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.131
ELB improved by 0.168999
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.978
ELB improved by 0.153328
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.839
ELB improved by 0.138647
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.715
ELB improved by 0.124812
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.603
ELB improved by 0.111744
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.503
ELB improved by 0.0994245
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.416
ELB improved by 0.087887
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.338
ELB improved by 0.0771965
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.271
ELB improved by 0.0674222
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.212
ELB improved by 0.0586137
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.162
ELB improved by 0.0507864
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.118
ELB improved by 0.0439173
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.08
ELB improved by 0.0379507
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.047
ELB improved by 0.032808
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.018
ELB improved by 0.0283984
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.994
ELB improved by 0.0246284
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.972
ELB improved by 0.0214089
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.954
ELB improved by 0.0186584
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.937
ELB improved by 0.0163057
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.923
ELB improved by 0.0142893
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.911
ELB improved by 0.0125575
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.9
ELB improved by 0.0110669
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.89
ELB improved by 0.00978125
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-808.963
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.623
ELB improved by 234.341
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.679
ELB improved by 56.9439
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.533
ELB improved by 46.1456
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.32
ELB improved by 26.2133
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.041
ELB improved by 11.2789
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.869
ELB improved by 5.17239
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.45
ELB improved by 3.41825
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.501
ELB improved by 2.9499
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.574
ELB improved by 2.92697
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.456
ELB improved by 3.11796
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.025
ELB improved by 3.43032
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.24
ELB improved by 3.78491
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.201
ELB improved by 4.03949
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.199
ELB improved by 4.00193
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.612
ELB improved by 3.58734
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.691
ELB improved by 2.92074
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.493
ELB improved by 2.19808
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.95
ELB improved by 1.54258
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.929
ELB improved by 1.02165
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.263
ELB improved by 0.665246
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.817
ELB improved by 0.446791
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.498
ELB improved by 0.318602
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.255
ELB improved by 0.243376
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.056
ELB improved by 0.198203
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.886
ELB improved by 0.170186
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.734
ELB improved by 0.152308
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.593
ELB improved by 0.140789
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.459
ELB improved by 0.133575
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.33
ELB improved by 0.129521
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.202
ELB improved by 0.127907
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.074
ELB improved by 0.128135
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.944
ELB improved by 0.129486
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.813
ELB improved by 0.131039
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.682
ELB improved by 0.131871
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.55
ELB improved by 0.131548
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.42
ELB improved by 0.130426
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.29
ELB improved by 0.129347
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.161
ELB improved by 0.129033
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.031
ELB improved by 0.129807
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.9
ELB improved by 0.131713
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.765
ELB improved by 0.134743
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.626
ELB improved by 0.138973
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.481
ELB improved by 0.14461
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.329
ELB improved by 0.152005
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.168
ELB improved by 0.161665
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.993
ELB improved by 0.174287
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.803
ELB improved by 0.190807
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.59
ELB improved by 0.212473
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.349
ELB improved by 0.240927
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.071
ELB improved by 0.27826
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.744
ELB improved by 0.326962
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.354
ELB improved by 0.389561
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.887
ELB improved by 0.467636
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.327
ELB improved by 0.559952
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.667
ELB improved by 0.660112
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.911
ELB improved by 0.75527
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.084
ELB improved by 0.827842
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.223
ELB improved by 0.860645
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.379
ELB improved by 0.843845
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.599
ELB improved by 0.779855
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.917
ELB improved by 0.681909
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.35
ELB improved by 0.567591
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.896
ELB improved by 0.453468
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.544
ELB improved by 0.351975
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.276
ELB improved by 0.268756
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.072
ELB improved by 0.203182
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.92
ELB improved by 0.152045
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.808
ELB improved by 0.112434
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.726
ELB improved by 0.0823429
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.665
ELB improved by 0.0601594
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.621
ELB improved by 0.0442816
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.588
ELB improved by 0.0331395
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.563
ELB improved by 0.0253709
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.543
ELB improved by 0.019923
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.527
ELB improved by 0.0160461
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.513
ELB improved by 0.0132324
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.502
ELB improved by 0.0111456
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.493
ELB improved by 0.00956466
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.648
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-591.198
ELB improved by 263.45
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.497
ELB improved by 63.7007
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.608
ELB improved by 49.8894
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.869
ELB improved by 25.7389
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.488
ELB improved by 9.38125
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.994
ELB improved by 4.49417
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.788
ELB improved by 3.20575
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.854
ELB improved by 2.93388
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.703
ELB improved by 3.1514
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.017
ELB improved by 3.68527
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.654
ELB improved by 4.3631
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.793
ELB improved by 4.86092
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.043
ELB improved by 4.74989
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.149
ELB improved by 3.89408
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.448
ELB improved by 2.70168
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.757
ELB improved by 1.6907
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.718
ELB improved by 1.03929
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.051
ELB improved by 0.667124
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.594
ELB improved by 0.456369
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.263
ELB improved by 0.331044
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.011
ELB improved by 0.251716
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.813
ELB improved by 0.198657
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.651
ELB improved by 0.161565
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.517
ELB improved by 0.134694
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.402
ELB improved by 0.114631
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.303
ELB improved by 0.0992503
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.215
ELB improved by 0.087176
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.138
ELB improved by 0.0774937
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.068
ELB improved by 0.0695805
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.005
ELB improved by 0.0630034
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.948
ELB improved by 0.0574554
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.895
ELB improved by 0.0527148
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.847
ELB improved by 0.048619
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.802
ELB improved by 0.0450463
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.76
ELB improved by 0.0419042
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.721
ELB improved by 0.0391214
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.684
ELB improved by 0.0366419
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.649
ELB improved by 0.0344211
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.617
ELB improved by 0.0324229
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.586
ELB improved by 0.030618
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.557
ELB improved by 0.028982
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.53
ELB improved by 0.0274947
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.504
ELB improved by 0.0261389
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.479
ELB improved by 0.0249002
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.455
ELB improved by 0.0237662
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.432
ELB improved by 0.0227263
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.411
ELB improved by 0.0217714
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.39
ELB improved by 0.0208937
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.37
ELB improved by 0.0200864
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.35
ELB improved by 0.0193438
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.332
ELB improved by 0.0186608
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.314
ELB improved by 0.0180333
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.296
ELB improved by 0.0174577
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.279
ELB improved by 0.0169313
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.263
ELB improved by 0.0164517
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.247
ELB improved by 0.0160173
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.231
ELB improved by 0.0156269
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.216
ELB improved by 0.0152802
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.201
ELB improved by 0.0149772
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.186
ELB improved by 0.0147189
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.172
ELB improved by 0.014507
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.157
ELB improved by 0.014344
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.143
ELB improved by 0.0142338
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.129
ELB improved by 0.0141812
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.115
ELB improved by 0.0141929
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.1
ELB improved by 0.0142772
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.086
ELB improved by 0.0144448
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.071
ELB improved by 0.0147087
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.056
ELB improved by 0.015085
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.041
ELB improved by 0.0155925
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.024
ELB improved by 0.016253
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.007
ELB improved by 0.01709
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.989
ELB improved by 0.0181269
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.97
ELB improved by 0.0193838
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.949
ELB improved by 0.0208731
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.926
ELB improved by 0.0225948
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.902
ELB improved by 0.024534
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.875
ELB improved by 0.0266651
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.846
ELB improved by 0.0289654
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.815
ELB improved by 0.0314401
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.78
ELB improved by 0.0341522
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.743
ELB improved by 0.0372498
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.702
ELB improved by 0.040983
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.657
ELB improved by 0.0457065
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.605
ELB improved by 0.05186
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.545
ELB improved by 0.0598936
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.475
ELB improved by 0.0700702
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.393
ELB improved by 0.0820904
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.298
ELB improved by 0.0946847
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.192
ELB improved by 0.105707
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.079
ELB improved by 0.113162
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.963
ELB improved by 0.116413
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.846
ELB improved by 0.116213
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.733
ELB improved by 0.113779
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.623
ELB improved by 0.110117
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.517
ELB improved by 0.105894
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.415
ELB improved by 0.101526
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.318
ELB improved by 0.097253
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.225
ELB improved by 0.0931903
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.135
ELB improved by 0.089364
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.05
ELB improved by 0.0857438
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.967
ELB improved by 0.0822698
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.888
ELB improved by 0.078875
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.813
ELB improved by 0.0755018
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.741
ELB improved by 0.0721142
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.672
ELB improved by 0.0687069
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.607
ELB improved by 0.0653126
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.545
ELB improved by 0.0620121
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.486
ELB improved by 0.0589549
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.429
ELB improved by 0.0564046
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.375
ELB improved by 0.054847
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.319
ELB improved by 0.0552536
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.26
ELB improved by 0.0597273
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.187
ELB improved by 0.0730171
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.081
ELB improved by 0.105115
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.912
ELB improved by 0.169203
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.66
ELB improved by 0.251973
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.37
ELB improved by 0.289928
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.101
ELB improved by 0.269177
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.865
ELB improved by 0.23577
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.652
ELB improved by 0.213463
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.448
ELB improved by 0.204403
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.252
ELB improved by 0.195701
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.081
ELB improved by 0.17124
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.947
ELB improved by 0.133552
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.849
ELB improved by 0.097945
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.777
ELB improved by 0.0720845
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.722
ELB improved by 0.0549567
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.679
ELB improved by 0.0435399
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.643
ELB improved by 0.0355958
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.613
ELB improved by 0.0298224
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.588
ELB improved by 0.0254858
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.565
ELB improved by 0.0221493
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.546
ELB improved by 0.0195317
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.529
ELB improved by 0.0174403
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.513
ELB improved by 0.0157386
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.498
ELB improved by 0.0143282
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.485
ELB improved by 0.013138
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.473
ELB improved by 0.0121163
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.462
ELB improved by 0.0112258
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.452
ELB improved by 0.0104395
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.442
ELB improved by 0.00973758
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.777
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.569
ELB improved by 310.207
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.662
ELB improved by 56.9068
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.108
ELB improved by 33.5542
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.163
ELB improved by 15.9456
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.153
ELB improved by 7.0094
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.063
ELB improved by 4.08999
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.459
ELB improved by 3.60444
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.9
ELB improved by 3.55842
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.248
ELB improved by 3.65255
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.504
ELB improved by 3.74363
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.842
ELB improved by 3.66175
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.564
ELB improved by 3.27796
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.92
ELB improved by 2.64403
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.94
ELB improved by 1.98026
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.482
ELB improved by 1.45823
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.392
ELB improved by 1.08998
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.568
ELB improved by 0.823534
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.939
ELB improved by 0.629055
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.445
ELB improved by 0.494004
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.041
ELB improved by 0.404598
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.694
ELB improved by 0.346214
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.387
ELB improved by 0.307486
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.106
ELB improved by 0.281022
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.844
ELB improved by 0.262382
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.595
ELB improved by 0.248953
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.355
ELB improved by 0.239189
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.123
ELB improved by 0.232171
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.896
ELB improved by 0.227372
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.671
ELB improved by 0.224496
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.448
ELB improved by 0.223349
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.224
ELB improved by 0.223688
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.999
ELB improved by 0.225069
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.773
ELB improved by 0.226789
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.544
ELB improved by 0.228032
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.316
ELB improved by 0.228213
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.089
ELB improved by 0.227253
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.863
ELB improved by 0.225547
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.64
ELB improved by 0.223695
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.418
ELB improved by 0.22225
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.196
ELB improved by 0.221604
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.974
ELB improved by 0.221967
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.751
ELB improved by 0.223372
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.525
ELB improved by 0.225681
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.296
ELB improved by 0.228584
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.065
ELB improved by 0.231599
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.831
ELB improved by 0.234073
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.595
ELB improved by 0.235212
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.361
ELB improved by 0.234143
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.131
ELB improved by 0.230024
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.909
ELB improved by 0.2222
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.699
ELB improved by 0.210381
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.504
ELB improved by 0.194775
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.328
ELB improved by 0.176118
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.172
ELB improved by 0.155565
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.038
ELB improved by 0.134458
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.924
ELB improved by 0.114057
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.828
ELB improved by 0.0953341
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.749
ELB improved by 0.0788797
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.685
ELB improved by 0.0649184
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.631
ELB improved by 0.0533987
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.587
ELB improved by 0.0441012
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.55
ELB improved by 0.0367339
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.519
ELB improved by 0.0310008
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.493
ELB improved by 0.0266439
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.469
ELB improved by 0.0234667
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.448
ELB improved by 0.0213483
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.428
ELB improved by 0.0202534
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.407
ELB improved by 0.0202445
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.386
ELB improved by 0.0214945
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.362
ELB improved by 0.0242857
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.333
ELB improved by 0.0289603
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.297
ELB improved by 0.0357399
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.253
ELB improved by 0.0443253
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.199
ELB improved by 0.0533454
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.139
ELB improved by 0.0602137
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.077
ELB improved by 0.0622312
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.018
ELB improved by 0.058572
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.967
ELB improved by 0.0510105
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.925
ELB improved by 0.0424085
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.89
ELB improved by 0.0348457
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.861
ELB improved by 0.0290769
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.836
ELB improved by 0.0249799
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.814
ELB improved by 0.0221068
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.794
ELB improved by 0.0199969
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.775
ELB improved by 0.0182901
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.759
ELB improved by 0.0167477
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.744
ELB improved by 0.0152391
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.73
ELB improved by 0.01372
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.718
ELB improved by 0.0122052
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.707
ELB improved by 0.0107398
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.697
ELB improved by 0.00937361
ELB converged
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 24 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
>
> proc.time()
user system elapsed
3.854 0.264 4.097
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.077 | 0.028 | 0.107 | |
| getPIPs | 0.065 | 0.024 | 0.088 | |
| graper | 0.111 | 0.029 | 0.139 | |
| makeExampleData | 0.012 | 0.001 | 0.014 | |
| makeExampleDataWithUnequalGroups | 0.018 | 0.001 | 0.019 | |
| plotELBO | 0.367 | 0.031 | 0.399 | |
| plotGroupPenalties | 1.016 | 0.075 | 1.091 | |
| plotPosterior | 0.810 | 0.032 | 0.844 | |
| predict.graper | 2.706 | 0.118 | 2.829 | |
| print.graper | 0.070 | 0.022 | 0.092 | |