| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-16 11:58:53 -0400 (Fri, 16 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE SIMD PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1664/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SIMD 1.6.0 Jiadi Zhu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
| Package: SIMD |
| Version: 1.6.0 |
| Command: rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.6.0.tar.gz |
| StartedAt: 2020-10-16 11:20:32 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 11:21:15 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 43.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: SIMD_1.6.0.zip |
| PackageFileSize: 404.4 KiB |
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### Running command:
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### rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.6.0.tar.gz
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install for i386
* installing *source* package 'SIMD' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pvalueclassify.c -o pvalueclassify.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/SIMD.buildbin-libdir/00LOCK-SIMD/00new/SIMD/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SIMD'
finding HTML links ... done
EM2_H1ESB1_MeDIP_sigleCpG html
EM2_H1ESB2_MeDIP_sigleCpG html
EM_H1ESB1_MeDIP_sigleCpG html
EMalgorithm html
EMtest html
H1ESB1_MRE_sigleCpG html
H1ESB2_MRE_sigleCpG html
SIMD-package html
all_CpGsite_bin_chr18 html
classifypvalue html
emalgth html
emalgth1 html
probBinom html
three_mre_cpg html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SIMD' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pvalueclassify.c -o pvalueclassify.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/SIMD.buildbin-libdir/SIMD/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIMD' as SIMD_1.6.0.zip
* DONE (SIMD)