Olivier Gevaert
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/MethylMix |
| Branch: RELEASE_3_11 |
| Last Commit: 8d6e047 |
| Last Changed Date: 2020-04-27 14:42:42 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:04 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE MethylMix PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1061/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| MethylMix 2.18.0 Olivier Gevaert
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: MethylMix |
| Version: 2.18.0 |
| Command: rm -rf MethylMix.buildbin-libdir && mkdir MethylMix.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MethylMix.buildbin-libdir MethylMix_2.18.0.tar.gz |
| StartedAt: 2020-10-17 11:00:32 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 11:00:49 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 16.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: MethylMix_2.18.0.zip |
| PackageFileSize: 3.071 MiB |
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### Running command:
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### rm -rf MethylMix.buildbin-libdir && mkdir MethylMix.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MethylMix.buildbin-libdir MethylMix_2.18.0.tar.gz
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install for i386
* installing *source* package 'MethylMix' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MethylMix'
finding HTML links ... done
BatchData html
ClusterProbes html
ComBat_NoFiles html
Download_DNAmethylation html
Download_GeneExpression html
GEcancer html
GetData html
METcancer html
METnormal html
MethylMix html
MethylMix_MixtureModel html
MethylMix_ModelGeneExpression html
MethylMix_ModelSingleGene html
MethylMix_PlotModel html
MethylMix_Predict html
MethylMix_RemoveFlipOver html
Preprocess_CancerSite_Methylation27k html
Preprocess_CancerSite_Methylation450k html
Preprocess_DNAmethylation html
Preprocess_GeneExpression html
Preprocess_MAdata_Cancer html
Preprocess_MAdata_Normal html
ProbeAnnotation html
SNPprobes html
TCGA_BatchCorrection_MolecularData html
TCGA_GENERIC_BatchCorrection html
TCGA_GENERIC_CheckBatchEffect html
TCGA_GENERIC_CleanUpSampleNames html
TCGA_GENERIC_GetSampleGroups html
TCGA_GENERIC_LoadIlluminaMethylationData
html
TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust
html
TCGA_GENERIC_MergeData html
TCGA_Load_MolecularData html
TCGA_Process_EstimateMissingValues html
betaEst_2 html
blc_2 html
combineForEachOutput html
get_firehoseData html
predictOneGene html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'MethylMix' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MethylMix' as MethylMix_2.18.0.zip
* DONE (MethylMix)