| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:52 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE ImpulseDE2 PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 873/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ImpulseDE2 1.12.0 David S Fischer
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | [ OK ] | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK |
| Package: ImpulseDE2 |
| Version: 1.12.0 |
| Command: rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.12.0.tar.gz |
| StartedAt: 2020-10-17 10:48:26 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 10:49:12 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 46.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: ImpulseDE2_1.12.0.zip |
| PackageFileSize: 623.6 KiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.12.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'ImpulseDE2' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ImpulseDE2'
finding HTML links ... done
ImpulseDE2Object-class html
append_strReport html
computeNormConst html
computeSizeFactors html
estimateImpulseParam html
estimateSigmoidParam html
evalImpulse html
evalImpulse_comp html
evalLogLikImpulse html
evalLogLikImpulse_comp html
evalLogLikMu html
evalLogLikMu_comp html
evalLogLikSigmoid html
evalLogLikSigmoid_comp html
evalSigmoid html
evalSigmoid_comp html
fitConstImpulse html
fitConstImpulseGene html
fitConstModel html
fitImpulseModel html
fitModels html
fitSigmoidGene html
fitSigmoidModel html
fitSigmoidModels html
get_accessors html
list_accession html
plotGenes html
plotHeatmap html
processData html
runDEAnalysis html
runDESeq2 html
runImpulseDE2 html
set_accessors html
simulateDataSetImpulseDE2 html
updateDEAnalysis html
writeReportToFile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ImpulseDE2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ImpulseDE2' as ImpulseDE2_1.12.0.zip
* DONE (ImpulseDE2)