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BUILD report for GmicR on celaya2

This page was generated on 2020-01-16 13:55:29 -0500 (Thu, 16 Jan 2020).

Package 714/1818HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GmicR 1.1.0
The package maintainer
Snapshot Date: 2020-01-15 16:46:30 -0500 (Wed, 15 Jan 2020)
URL: https://git.bioconductor.org/packages/GmicR
Branch: master
Last Commit: 2080a6a
Last Changed Date: 2019-10-29 13:43:43 -0500 (Tue, 29 Oct 2019)
malbec2 Linux (Ubuntu 18.04.3 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: GmicR
Version: 1.1.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GmicR
StartedAt: 2020-01-16 00:56:53 -0500 (Thu, 16 Jan 2020)
EndedAt: 2020-01-16 01:21:38 -0500 (Thu, 16 Jan 2020)
EllapsedTime: 1485.6 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GmicR
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* checking for file ‘GmicR/DESCRIPTION’ ... OK
* preparing ‘GmicR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GmicR_vignette.Rmd’ using rmarkdown
Loading required package: dynamicTreeCut
Loading required package: fastcluster

Attaching package: 'fastcluster'

The following object is masked from 'package:stats':

    hclust



Attaching package: 'WGCNA'

The following object is masked from 'package:stats':

    cor

Warning: call dbDisconnect() when finished working with a connection
Quitting from lines 260-261 (GmicR_vignette.Rmd) 
Error: processing vignette 'GmicR_vignette.Rmd' failed with diagnostics:
'grain.CPTspec' is not an exported object from 'namespace:gRain'
--- failed re-building ‘GmicR_vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘GmicR_vignette.Rmd’

Error: Vignette re-building failed.
Execution halted