| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:43 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE GNET2 PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 748/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GNET2 1.4.0 Chen Chen
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
| Package: GNET2 |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GNET2_1.4.0.tar.gz && rm -rf GNET2.buildbin-libdir && mkdir GNET2.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GNET2.buildbin-libdir GNET2_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GNET2_1.4.0.zip && rm GNET2_1.4.0.tar.gz GNET2_1.4.0.zip |
| StartedAt: 2020-10-16 17:56:09 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:57:24 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 75.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GNET2_1.4.0.tar.gz && rm -rf GNET2.buildbin-libdir && mkdir GNET2.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GNET2.buildbin-libdir GNET2_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GNET2_1.4.0.zip && rm GNET2_1.4.0.tar.gz GNET2_1.4.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 17170 100 17170 0 0 253k 0 --:--:-- --:--:-- --:--:-- 284k
install for i386
* installing *source* package 'GNET2' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gnet_rcpp.cpp -o gnet_rcpp.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GNET2.dll tmp.def RcppExports.o gnet_rcpp.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/GNET2.buildbin-libdir/00LOCK-GNET2/00new/GNET2/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GNET2'
finding HTML links ... done
build_module html
build_moduleR html
build_moduleR_heuristic html
build_split_table html
calc_likelihood_score html
extract_edges html
get_correlation_list html
gnet html
kneepointDetection html
plot_gene_group html
plot_group_correlation html
plot_tree html
save_gnet html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GNET2' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gnet_rcpp.cpp -o gnet_rcpp.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GNET2.dll tmp.def RcppExports.o gnet_rcpp.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/GNET2.buildbin-libdir/GNET2/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GNET2' as GNET2_1.4.0.zip
* DONE (GNET2)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'GNET2' successfully unpacked and MD5 sums checked