Philippe Hupe
| Snapshot Date: 2020-01-15 16:46:30 -0500 (Wed, 15 Jan 2020) |
| URL: https://git.bioconductor.org/packages/GLAD |
| Branch: master |
| Last Commit: 2705d7d |
| Last Changed Date: 2019-10-29 13:34:36 -0500 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-01-16 13:29:18 -0500 (Thu, 16 Jan 2020).
| Package 706/1818 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GLAD 2.51.0 Philippe Hupe
| malbec2 | Linux (Ubuntu 18.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | [ ERROR ] | skipped | skipped |
| Package: GLAD |
| Version: 2.51.0 |
| Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GLAD |
| StartedAt: 2020-01-15 19:52:06 -0500 (Wed, 15 Jan 2020) |
| EndedAt: 2020-01-15 19:52:46 -0500 (Wed, 15 Jan 2020) |
| EllapsedTime: 39.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GLAD
###
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* checking for file ‘GLAD/DESCRIPTION’ ... OK
* preparing ‘GLAD’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GLAD.Rnw’ using Sweave
Loading required package: GLAD
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Have fun with GLAD
For smoothing it is possible to use either
the AWS algorithm (Polzehl and Spokoiny, 2002,
or the HaarSeg algorithm (Ben-Yaacov and Eldar, Bioinformatics, 2008,
If you use the package with AWS, please cite:
Hupe et al. (Bioinformatics, 2004, and Polzehl and Spokoiny (2002,
If you use the package with HaarSeg, please cite:
Hupe et al. (Bioinformatics, 2004, and (Ben-Yaacov and Eldar, Bioinformatics, 2008,
For fast computation it is recommanded to use
the daglad function with smoothfunc=haarseg
######################################################################################
New options are available in daglad: see help for details.
Error: processing vignette 'GLAD.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'GLAD.tex' failed.
LaTeX errors:
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See the inputenc package documentation for explanation.
Type H <return> for immediate help.
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! Package inputenc Error: Invalid UTF-8 byte sequence.
See the inputenc package documentation for explanation.
Type H <return> for immediate help.
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l.17 \bibitem[Hup<e9> et~al., 2004]{hupe04}
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l.17 \bibitem[Hup<e9> et~al., 2004]{hupe04}
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l.17 \bibitem[Hup<e9> et~al., 2004]{hupe04}
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! Package inputenc Error: Invalid UTF-8 byte sequence.
See the inputenc package documentation for explanation.
Type H <return> for immediate help.
...
--- failed re-building ‘GLAD.Rnw’
SUMMARY: processing the following file failed:
‘GLAD.Rnw’
Error: Vignette re-building failed.
Execution halted