Sean Davis
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/GEOquery |
| Branch: RELEASE_3_11 |
| Last Commit: 50417b3 |
| Last Changed Date: 2020-04-27 14:12:36 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:40 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE GEOquery PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 722/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GEOquery 2.56.0 Sean Davis
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: GEOquery |
| Version: 2.56.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GEOquery_2.56.0.tar.gz && rm -rf GEOquery.buildbin-libdir && mkdir GEOquery.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEOquery.buildbin-libdir GEOquery_2.56.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GEOquery_2.56.0.zip && rm GEOquery_2.56.0.tar.gz GEOquery_2.56.0.zip |
| StartedAt: 2020-10-16 17:14:19 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:15:15 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 56.2 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GEOquery_2.56.0.tar.gz && rm -rf GEOquery.buildbin-libdir && mkdir GEOquery.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEOquery.buildbin-libdir GEOquery_2.56.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GEOquery_2.56.0.zip && rm GEOquery_2.56.0.tar.gz GEOquery_2.56.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
54 12.8M 54 7216k 0 0 53.9M 0 --:--:-- --:--:-- --:--:-- 56.3M
100 12.8M 100 12.8M 0 0 70.5M 0 --:--:-- --:--:-- --:--:-- 72.9M
install for i386
* installing *source* package 'GEOquery' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GEOquery'
finding HTML links ... done
GDS-class html
GEOData-accessors html
GEOData-class html
GEODataTable-class html
GPL-class html
GSE-class html
GSM-class html
coercion html
getDirListing html
getGEO html
getGEOSuppFiles html
getGEOfile html
getGSEDataTables html
gunzip html
parseGEO html
parseGSEMatrix html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GEOquery' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GEOquery' as GEOquery_2.56.0.zip
* DONE (GEOquery)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'GEOquery' successfully unpacked and MD5 sums checked