Panos Balomenos
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/CHRONOS |
| Branch: RELEASE_3_11 |
| Last Commit: 8b54ca8 |
| Last Changed Date: 2020-04-27 14:57:26 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:16 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE CHRONOS PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 298/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CHRONOS 1.16.0 Panos Balomenos
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: CHRONOS |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CHRONOS_1.16.0.tar.gz && rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CHRONOS_1.16.0.zip && rm CHRONOS_1.16.0.tar.gz CHRONOS_1.16.0.zip |
| StartedAt: 2020-10-16 18:10:35 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:12:03 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 88.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CHRONOS_1.16.0.tar.gz && rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CHRONOS_1.16.0.zip && rm CHRONOS_1.16.0.tar.gz CHRONOS_1.16.0.zip
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install for i386
* installing *source* package 'CHRONOS' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CHRONOS'
finding HTML links ... done
CHRONOSrun html
convertMiRNANomenclature html
convertNomenclature html
createPathwayGraphs html
downloadKEGGPathwayList html
downloadMiRecords html
downloadPathways html
extractLinearSubpathways html
extractNonLinearSubpathways html
getEdgeTypes html
importExpressions html
pathwayMeasures html
scoreSubpathways html
subpathwayKEGGmap html
subpathwayMiRNAs html
visualizeResults html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CHRONOS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CHRONOS' as CHRONOS_1.16.0.zip
* DONE (CHRONOS)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'CHRONOS' successfully unpacked and MD5 sums checked