Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

INSTALL report for trackViewer on tokay2

This page was generated on 2020-10-17 11:57:57 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE trackViewer PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1820/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
trackViewer 1.24.2
Jianhong Ou
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/trackViewer
Branch: RELEASE_3_11
Last Commit: 8cfccec
Last Changed Date: 2020-08-26 16:42:01 -0400 (Wed, 26 Aug 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: trackViewer
Version: 1.24.2
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/trackViewer_1.24.2.tar.gz && rm -rf trackViewer.buildbin-libdir && mkdir trackViewer.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=trackViewer.buildbin-libdir trackViewer_1.24.2.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL trackViewer_1.24.2.zip && rm trackViewer_1.24.2.tar.gz trackViewer_1.24.2.zip
StartedAt: 2020-10-16 19:38:10 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:40:37 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 147.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/trackViewer_1.24.2.tar.gz && rm -rf trackViewer.buildbin-libdir && mkdir trackViewer.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=trackViewer.buildbin-libdir trackViewer_1.24.2.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL trackViewer_1.24.2.zip && rm trackViewer_1.24.2.tar.gz trackViewer_1.24.2.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  278k  100  278k    0     0  1529k      0 --:--:-- --:--:-- --:--:-- 1588k

install for i386

* installing *source* package 'trackViewer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'trackViewer'
    finding HTML links ... done
    GRoperator                              html  
    addArrowMark                            html  
    addGuideLine                            html  
    browseTracks-shiny                      html  
    browseTracks                            html  
    coverageGR                              html  
    dandelion.plot                          html  
    geneModelFromTxdb                       html  
    geneTrack                               html  
    getCurTrackViewport                     html  
    getGeneIDsFromTxDb                      html  
    getLocation                             html  
    gi2track                                html  
    gieStain                                html  
    gridPlot                                html  
    ideogramPlot                            html  
    importBam                               html  
    importData                              html  
    importScore                             html  
    loadIdeogram                            html  
    lolliplot                               html  
    optimizeStyle                           html  
    parse2GRanges                           html  
    parseWIG                                html  
    plotGInteractions                       html  
    plotGRanges                             html  
    plotIdeo                                html  
    plotOneIdeo                             html  
    pos-class                               html  
    trackList-class                         html  
    trackStyle-class                        html  
    trackViewer-package                     html  
    trackViewerStyle-class                  html  
    viewGene                                html  
    viewTracks                              html  
    xscale-class                            html  
    yaxisStyle-class                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'trackViewer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'trackViewer' as trackViewer_1.24.2.zip
* DONE (trackViewer)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'trackViewer' successfully unpacked and MD5 sums checked