Thu-Hien To
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/strandCheckR |
| Branch: RELEASE_3_11 |
| Last Commit: bfc166e |
| Last Changed Date: 2020-04-27 15:18:20 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:52 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE strandCheckR PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1747/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| strandCheckR 1.6.0 Thu-Hien To
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: strandCheckR |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/strandCheckR_1.6.0.tar.gz && rm -rf strandCheckR.buildbin-libdir && mkdir strandCheckR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=strandCheckR.buildbin-libdir strandCheckR_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL strandCheckR_1.6.0.zip && rm strandCheckR_1.6.0.tar.gz strandCheckR_1.6.0.zip |
| StartedAt: 2020-10-16 19:18:07 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:20:08 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 121.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/strandCheckR_1.6.0.tar.gz && rm -rf strandCheckR.buildbin-libdir && mkdir strandCheckR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=strandCheckR.buildbin-libdir strandCheckR_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL strandCheckR_1.6.0.zip && rm strandCheckR_1.6.0.tar.gz strandCheckR_1.6.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 486k 100 486k 0 0 6760k 0 --:--:-- --:--:-- --:--:-- 7261k
install for i386
* installing *source* package 'strandCheckR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'strandCheckR'
finding HTML links ... done
calculateStrandCoverage html
calculateStrandNbReads html
checkPairedEnd html
concatenateAlignments html
filterDNA html
getWinFromBamFile html
getWinFromGranges html
getWinFromIRanges html
finding level-2 HTML links ... done
getWinFromReadInfo html
getWinOfAlignments html
intersectWithFeature html
keptProbaWin html
keptReadFragment html
plotHist html
plotWin html
strandCheckR-package html
summarizeHist html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'strandCheckR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'strandCheckR' as strandCheckR_1.6.0.zip
* DONE (strandCheckR)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'strandCheckR' successfully unpacked and MD5 sums checked