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CHECK report for sparseMatrixStats on tokay2

This page was generated on 2020-10-17 11:57:51 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE sparseMatrixStats PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1702/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sparseMatrixStats 1.0.5
Constantin Ahlmann-Eltze
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/sparseMatrixStats
Branch: RELEASE_3_11
Last Commit: 0eaf6f7
Last Changed Date: 2020-05-24 07:16:39 -0400 (Sun, 24 May 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK [ OK ] NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: sparseMatrixStats
Version: 1.0.5
Command: C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:sparseMatrixStats.install-out.txt --library=C:\Users\biocbuild\bbs-3.11-bioc\R\library --no-vignettes --timings sparseMatrixStats_1.0.5.tar.gz
StartedAt: 2020-10-17 08:30:11 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 08:32:01 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 110.6 seconds
RetCode: 0
Status:  OK  
CheckDir: sparseMatrixStats.Rcheck
Warnings: 0

Command output

##############################################################################
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###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:sparseMatrixStats.install-out.txt --library=C:\Users\biocbuild\bbs-3.11-bioc\R\library --no-vignettes --timings sparseMatrixStats_1.0.5.tar.gz
###
##############################################################################
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* using log directory 'C:/Users/biocbuild/bbs-3.11-bioc/meat/sparseMatrixStats.Rcheck'
* using R version 4.0.3 (2020-10-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'sparseMatrixStats/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'sparseMatrixStats' version '1.0.5'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'sparseMatrixStats' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files for i386 is not available
Note: information on .o files for x64 is not available
File 'C:/Users/biocbuild/bbs-3.11-bioc/R/library/sparseMatrixStats/libs/i386/sparseMatrixStats.dll':
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
  Found 'printf', possibly from 'printf' (C)
File 'C:/Users/biocbuild/bbs-3.11-bioc/R/library/sparseMatrixStats/libs/x64/sparseMatrixStats.dll':
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
  Found 'printf', possibly from 'printf' (C)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs. The detected symbols are linked into the code but
might come from libraries and not actually be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'testthat.R'
 OK
** running tests for arch 'x64' ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'C:/Users/biocbuild/bbs-3.11-bioc/meat/sparseMatrixStats.Rcheck/00check.log'
for details.

Installation output

sparseMatrixStats.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/sparseMatrixStats_1.0.5.tar.gz && rm -rf sparseMatrixStats.buildbin-libdir && mkdir sparseMatrixStats.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sparseMatrixStats.buildbin-libdir sparseMatrixStats_1.0.5.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL sparseMatrixStats_1.0.5.zip && rm sparseMatrixStats_1.0.5.tar.gz sparseMatrixStats_1.0.5.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 35176  100 35176    0     0   528k      0 --:--:-- --:--:-- --:--:--  592k

install for i386

* installing *source* package 'sparseMatrixStats' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++  -std=gnu++14 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++14 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c SparseMatrixView.cpp -o SparseMatrixView.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++14 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c methods.cpp -o methods.o
In file included from methods.cpp:6:
quantile.h: In instantiation of 'double quantile_sparse(T, int, double) [with T = VectorSubsetView<14>]':
quantile.h:83:80:   required from here
quantile.h:35:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
   for(int i = 0; i < sorted_values.size() + number_of_zeros; i++){
                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
methods.cpp: In instantiation of 'dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)> [with auto:17 = SkipNAVectorSubsetView<14>; auto:18 = SkipNAVectorSubsetView<13>]':
methods.cpp:25:18:   required from 'Rcpp::NumericVector reduce_matrix_double(Rcpp::S4, bool, Functor) [with Functor = dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Rcpp::S4 = Rcpp::S4_Impl<Rcpp::PreserveStorage>]'
methods.cpp:371:4:   required from here
methods.cpp:344:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
     for(int i = 0; i < sorted_values.size() + number_of_zeros; i++){
                    ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
methods.cpp: In instantiation of 'dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)> [with auto:17 = VectorSubsetView<14>; auto:18 = VectorSubsetView<13>]':
methods.cpp:30:18:   required from 'Rcpp::NumericVector reduce_matrix_double(Rcpp::S4, bool, Functor) [with Functor = dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Rcpp::S4 = Rcpp::S4_Impl<Rcpp::PreserveStorage>]'
methods.cpp:371:4:   required from here
methods.cpp:344:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
In file included from methods.cpp:6:
quantile.h: In instantiation of 'double quantile_sparse(T, int, double) [with T = SkipNAVectorSubsetView<14>]':
methods.cpp:222:27:   required from 'dgCMatrix_colMedians(Rcpp::S4, bool)::<lambda(auto:6, auto:7, int)> [with auto:6 = SkipNAVectorSubsetView<14>; auto:7 = SkipNAVectorSubsetView<13>]'
methods.cpp:25:18:   required from 'Rcpp::NumericVector reduce_matrix_double(Rcpp::S4, bool, Functor) [with Functor = dgCMatrix_colMedians(Rcpp::S4, bool)::<lambda(auto:6, auto:7, int)>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Rcpp::S4 = Rcpp::S4_Impl<Rcpp::PreserveStorage>]'
methods.cpp:223:4:   required from here
quantile.h:35:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
   for(int i = 0; i < sorted_values.size() + number_of_zeros; i++){
                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o sparseMatrixStats.dll tmp.def RcppExports.o SparseMatrixView.o methods.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/sparseMatrixStats.buildbin-libdir/00LOCK-sparseMatrixStats/00new/sparseMatrixStats/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'sparseMatrixStats'
    finding HTML links ... done
    colAlls-dgCMatrix-method                html  
    colAnyNAs-dgCMatrix-method              html  
    colAnys-dgCMatrix-method                html  
    colAvgsPerRowSet-dgCMatrix-method       html  
    colCollapse-dgCMatrix-method            html  
    colCounts-dgCMatrix-method              html  
    colCummaxs-dgCMatrix-method             html  
    colCummins-dgCMatrix-method             html  
    colCumprods-dgCMatrix-method            html  
    colCumsums-dgCMatrix-method             html  
    colDiffs-dgCMatrix-method               html  
    colIQRDiffs-dgCMatrix-method            html  
    colIQRs-dgCMatrix-method                html  
    colLogSumExps-dgCMatrix-method          html  
    colMadDiffs-dgCMatrix-method            html  
    colMads-dgCMatrix-method                html  
    colMaxs-dgCMatrix-method                html  
    colMeans2-dgCMatrix-method              html  
    colMedians-dgCMatrix-method             html  
    colMins-dgCMatrix-method                html  
    colOrderStats-dgCMatrix-method          html  
    colProds-dgCMatrix-method               html  
    colQuantiles-dgCMatrix-method           html  
    colRanges-dgCMatrix-method              html  
    colRanks-dgCMatrix-method               html  
    colSdDiffs-dgCMatrix-method             html  
    colSds-dgCMatrix-method                 html  
    colSums2-dgCMatrix-method               html  
    colTabulates-dgCMatrix-method           html  
    colVarDiffs-dgCMatrix-method            html  
    colVars-dgCMatrix-method                html  
    colWeightedMads-dgCMatrix-method        html  
    colWeightedMeans-dgCMatrix-method       html  
    colWeightedMedians-dgCMatrix-method     html  
    colWeightedSds-dgCMatrix-method         html  
    colWeightedVars-dgCMatrix-method        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'sparseMatrixStats' ...
** libs
"C:/rtools40/mingw64/bin/"g++  -std=gnu++14 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++14 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c SparseMatrixView.cpp -o SparseMatrixView.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++14 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c methods.cpp -o methods.o
In file included from methods.cpp:6:
quantile.h: In instantiation of 'double quantile_sparse(T, int, double) [with T = VectorSubsetView<14>]':
quantile.h:83:80:   required from here
quantile.h:35:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
   for(int i = 0; i < sorted_values.size() + number_of_zeros; i++){
                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
methods.cpp: In instantiation of 'dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)> [with auto:17 = SkipNAVectorSubsetView<14>; auto:18 = SkipNAVectorSubsetView<13>]':
methods.cpp:25:18:   required from 'Rcpp::NumericVector reduce_matrix_double(Rcpp::S4, bool, Functor) [with Functor = dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Rcpp::S4 = Rcpp::S4_Impl<Rcpp::PreserveStorage>]'
methods.cpp:371:4:   required from here
methods.cpp:344:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
     for(int i = 0; i < sorted_values.size() + number_of_zeros; i++){
                    ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
methods.cpp: In instantiation of 'dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)> [with auto:17 = VectorSubsetView<14>; auto:18 = VectorSubsetView<13>]':
methods.cpp:30:18:   required from 'Rcpp::NumericVector reduce_matrix_double(Rcpp::S4, bool, Functor) [with Functor = dgCMatrix_colOrderStats(Rcpp::S4, int, bool)::<lambda(auto:17, auto:18, int)>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Rcpp::S4 = Rcpp::S4_Impl<Rcpp::PreserveStorage>]'
methods.cpp:371:4:   required from here
methods.cpp:344:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
In file included from methods.cpp:6:
quantile.h: In instantiation of 'double quantile_sparse(T, int, double) [with T = SkipNAVectorSubsetView<14>]':
methods.cpp:222:27:   required from 'dgCMatrix_colMedians(Rcpp::S4, bool)::<lambda(auto:6, auto:7, int)> [with auto:6 = SkipNAVectorSubsetView<14>; auto:7 = SkipNAVectorSubsetView<13>]'
methods.cpp:25:18:   required from 'Rcpp::NumericVector reduce_matrix_double(Rcpp::S4, bool, Functor) [with Functor = dgCMatrix_colMedians(Rcpp::S4, bool)::<lambda(auto:6, auto:7, int)>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Rcpp::S4 = Rcpp::S4_Impl<Rcpp::PreserveStorage>]'
methods.cpp:223:4:   required from here
quantile.h:35:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
   for(int i = 0; i < sorted_values.size() + number_of_zeros; i++){
                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o sparseMatrixStats.dll tmp.def RcppExports.o SparseMatrixView.o methods.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/sparseMatrixStats.buildbin-libdir/sparseMatrixStats/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sparseMatrixStats' as sparseMatrixStats_1.0.5.zip
* DONE (sparseMatrixStats)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'sparseMatrixStats' successfully unpacked and MD5 sums checked

Tests output

sparseMatrixStats.Rcheck/tests_i386/testthat.Rout


R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(sparseMatrixStats)
> 
> test_check("sparseMatrixStats")
== testthat results  ===========================================================
[ OK: 804 | SKIPPED: 19 | WARNINGS: 0 | FAILED: 0 ]
> 
> proc.time()
   user  system elapsed 
   4.03    0.17    4.18

sparseMatrixStats.Rcheck/tests_x64/testthat.Rout


R version 4.0.3 (2020-10-10) -- "Bunny-Wunnies Freak Out"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(sparseMatrixStats)
> 
> test_check("sparseMatrixStats")
== testthat results  ===========================================================
[ OK: 804 | SKIPPED: 19 | WARNINGS: 0 | FAILED: 0 ]
> 
> proc.time()
   user  system elapsed 
   5.96    0.40    6.36

Example timings

sparseMatrixStats.Rcheck/examples_i386/sparseMatrixStats-Ex.timings

nameusersystemelapsed
colAlls-dgCMatrix-method000
colAnyNAs-dgCMatrix-method000
colAnys-dgCMatrix-method000
colAvgsPerRowSet-dgCMatrix-method000
colCollapse-dgCMatrix-method000
colCounts-dgCMatrix-method000
colCummaxs-dgCMatrix-method000
colCummins-dgCMatrix-method000
colCumprods-dgCMatrix-method000
colCumsums-dgCMatrix-method000
colDiffs-dgCMatrix-method000
colIQRDiffs-dgCMatrix-method000
colIQRs-dgCMatrix-method000
colLogSumExps-dgCMatrix-method000
colMadDiffs-dgCMatrix-method000
colMads-dgCMatrix-method000
colMaxs-dgCMatrix-method0.010.000.02
colMeans2-dgCMatrix-method000
colMedians-dgCMatrix-method000
colMins-dgCMatrix-method000
colOrderStats-dgCMatrix-method000
colProds-dgCMatrix-method000
colQuantiles-dgCMatrix-method000
colRanges-dgCMatrix-method000
colRanks-dgCMatrix-method000
colSdDiffs-dgCMatrix-method000
colSds-dgCMatrix-method000
colSums2-dgCMatrix-method000
colTabulates-dgCMatrix-method000
colVarDiffs-dgCMatrix-method000
colVars-dgCMatrix-method000
colWeightedMads-dgCMatrix-method000
colWeightedMeans-dgCMatrix-method000
colWeightedMedians-dgCMatrix-method000
colWeightedSds-dgCMatrix-method0.010.000.02
colWeightedVars-dgCMatrix-method000

sparseMatrixStats.Rcheck/examples_x64/sparseMatrixStats-Ex.timings

nameusersystemelapsed
colAlls-dgCMatrix-method000
colAnyNAs-dgCMatrix-method000
colAnys-dgCMatrix-method000
colAvgsPerRowSet-dgCMatrix-method000
colCollapse-dgCMatrix-method000
colCounts-dgCMatrix-method000
colCummaxs-dgCMatrix-method000
colCummins-dgCMatrix-method000
colCumprods-dgCMatrix-method000
colCumsums-dgCMatrix-method000
colDiffs-dgCMatrix-method000
colIQRDiffs-dgCMatrix-method0.020.000.02
colIQRs-dgCMatrix-method000
colLogSumExps-dgCMatrix-method000
colMadDiffs-dgCMatrix-method000
colMads-dgCMatrix-method000
colMaxs-dgCMatrix-method000
colMeans2-dgCMatrix-method000
colMedians-dgCMatrix-method000
colMins-dgCMatrix-method000
colOrderStats-dgCMatrix-method000
colProds-dgCMatrix-method000
colQuantiles-dgCMatrix-method000
colRanges-dgCMatrix-method000
colRanks-dgCMatrix-method000
colSdDiffs-dgCMatrix-method000
colSds-dgCMatrix-method000
colSums2-dgCMatrix-method000
colTabulates-dgCMatrix-method000
colVarDiffs-dgCMatrix-method000
colVars-dgCMatrix-method000
colWeightedMads-dgCMatrix-method000
colWeightedMeans-dgCMatrix-method000
colWeightedMedians-dgCMatrix-method000
colWeightedSds-dgCMatrix-method000
colWeightedVars-dgCMatrix-method000