Przemyslaw Stempor
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/seqplots |
| Branch: RELEASE_3_11 |
| Last Commit: 62622a6 |
| Last Changed Date: 2020-04-27 14:43:06 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:48 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE seqplots PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1633/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| seqplots 1.26.0 Przemyslaw Stempor
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: seqplots |
| Version: 1.26.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/seqplots_1.26.0.tar.gz && rm -rf seqplots.buildbin-libdir && mkdir seqplots.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqplots.buildbin-libdir seqplots_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL seqplots_1.26.0.zip && rm seqplots_1.26.0.tar.gz seqplots_1.26.0.zip |
| StartedAt: 2020-10-16 18:45:07 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:48:07 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 180.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/seqplots_1.26.0.tar.gz && rm -rf seqplots.buildbin-libdir && mkdir seqplots.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=seqplots.buildbin-libdir seqplots_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL seqplots_1.26.0.zip && rm seqplots_1.26.0.tar.gz seqplots_1.26.0.zip
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install for i386
* installing *source* package 'seqplots' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'seqplots'
finding HTML links ... done
MotifSetup-class html
PlotSetArray-class html
PlotSetList-class html
PlotSetPair-class html
add_local_file html
deployServerInstance html
getPlotSetArray html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/getPlotSetArray.Rd:144: file link 'installed.genomes' in package 'BSgenome' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/getPlotSetArray.Rd:147: file link 'BSgenome' in package 'BSgenome' does not exist and so has been treated as a topic
getREF html
ggHeatmapPlotWrapper html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/ggHeatmapPlotWrapper.Rd:75: file link 'grDevices' in package 'grDevices' does not exist and so has been treated as a topic
heatmapPlotWrapper html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/heatmapPlotWrapper.Rd:76: file link 'grDevices' in package 'grDevices' does not exist and so has been treated as a topic
imPlot2 html
import.narrowPeak html
num2bp html
num2sci html
plot html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/plot.Rd:25: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
plotAverage html
plotHeatmap html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/plotHeatmap.Rd:177: file link 'grDevices' in package 'grDevices' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUBgalA/R.INSTALL25404a813e6/seqplots/man/plotHeatmap.Rd:192: file link 'geom_raster' in package 'ggplot2' does not exist and so has been treated as a topic
plotMext html
run html
seqplots-generic html
seqplots html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'seqplots' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'seqplots' as seqplots_1.26.0.zip
* DONE (seqplots)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'seqplots' successfully unpacked and MD5 sums checked