Augustin Luna
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/paxtoolsr |
| Branch: RELEASE_3_11 |
| Last Commit: e4c4062 |
| Last Changed Date: 2020-04-27 14:44:11 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:22 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE paxtoolsr PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1279/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| paxtoolsr 1.22.0 Augustin Luna
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK |
| Package: paxtoolsr |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/paxtoolsr_1.22.0.tar.gz && rm -rf paxtoolsr.buildbin-libdir && mkdir paxtoolsr.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=paxtoolsr.buildbin-libdir paxtoolsr_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL paxtoolsr_1.22.0.zip && rm paxtoolsr_1.22.0.tar.gz paxtoolsr_1.22.0.zip |
| StartedAt: 2020-10-16 17:31:27 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:33:02 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 94.8 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/paxtoolsr_1.22.0.tar.gz && rm -rf paxtoolsr.buildbin-libdir && mkdir paxtoolsr.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=paxtoolsr.buildbin-libdir paxtoolsr_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL paxtoolsr_1.22.0.zip && rm paxtoolsr_1.22.0.tar.gz paxtoolsr_1.22.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 24.2M 100 24.2M 0 0 53.8M 0 --:--:-- --:--:-- --:--:-- 54.7M
install for i386
* installing *source* package 'paxtoolsr' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'paxtoolsr'
finding HTML links ... done
addAttributeList html
convertDataFrameListsToVectors html
convertSifToGmt html
downloadFile html
downloadPc2 html
downloadSignedPC html
fetch html
filterSif html
getCacheFiles html
getErrorMessage html
getNeighbors html
getPc html
getPcDatabaseNames html
getPcUrl html
getShortestPathSif html
getSifInteractionCategories html
graphPc html
integrateBiopax html
loadSifInIgraph html
mapAttributes html
mapValues html
mergeBiopax html
pcDirections html
pcFormats html
pcGraphQueries html
processPcRequest html
readBiopax html
readGmt html
readPcPathwaysInfo html
readSbgn html
readSif html
readSifnx html
searchListOfVectors html
searchPc html
splitSifnxByPathway html
summarize html
summarizeSif html
toCytoscape html
toGSEA html
toLevel3 html
toSBGN html
toSif html
toSifnx html
topPathways html
traverse html
validate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'paxtoolsr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'paxtoolsr' as paxtoolsr_1.22.0.zip
* DONE (paxtoolsr)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'paxtoolsr' successfully unpacked and MD5 sums checked