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This page was generated on 2020-10-17 11:56:45 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE gpuMagic PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 766/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
gpuMagic 1.4.0 Jiefei Wang
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: gpuMagic |
Version: 1.4.0 |
Command: rm -rf gpuMagic.buildbin-libdir && mkdir gpuMagic.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpuMagic.buildbin-libdir gpuMagic_1.4.0.tar.gz |
StartedAt: 2020-10-17 10:41:45 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 10:42:32 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 47.8 seconds |
RetCode: 0 |
Status: OK |
PackageFile: gpuMagic_1.4.0.zip |
PackageFileSize: 2.115 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf gpuMagic.buildbin-libdir && mkdir gpuMagic.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpuMagic.buildbin-libdir gpuMagic_1.4.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'gpuMagic' ... ** using staged installation ** libs entered "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C_Interface.cpp -o C_Interface.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c R_functionRegistration.cpp -o R_functionRegistration.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Tools.cpp -o Tools.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kernelManager.cpp -o kernelManager.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c openArray.cpp -o openArray.o cd ./ICD_loader && mkdir -p ./i386 && /usr/bin/make ./i386/libOpenCL.a \ CC=""C:/rtools40/mingw32/bin/"gcc " CFLAGS=" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign" AR=""C:/rtools40/mingw32/bin/"ar" RM="rm -f" OPENCL_INC="../../inst/include/OpenCL_header" \ ICD_OS=icd_windows make[1]: Entering directory '/c/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUbU1ZA/R.INSTALL2becd7a3330/gpuMagic/src/ICD_loader' C:/rtools40/mingw32/bin/gcc -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c icd.c -o i386/icd.o C:/rtools40/mingw32/bin/gcc -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c icd_dispatch.c -o i386/icd_dispatch.o C:/rtools40/mingw32/bin/gcc -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c icd_windows.c -o i386/icd_windows.o rm -f i386/libOpenCL.a C:/rtools40/mingw32/bin/ar rcs i386/libOpenCL.a i386/icd.o i386/icd_dispatch.o i386/icd_windows.o make[1]: Leaving directory '/c/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpUbU1ZA/R.INSTALL2becd7a3330/gpuMagic/src/ICD_loader' C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o gpuMagic.dll tmp.def C_Interface.o R_functionRegistration.o Tools.o kernelManager.o openArray.o ./ICD_loader/i386/libOpenCL.a -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/gpuMagic.buildbin-libdir/00LOCK-gpuMagic/00new/gpuMagic/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gpuMagic' finding HTML links ... done DeviceInfo html Matrix html Scalar html as.matrix.gpuMatrix html as.vector.gpuMatrix html compileGPUCode html dot-kernel html extract-methods html gpuMagic.getAvailableType html gpuMagic.getMemUsage html gpuMagic.getOptions html gpuMagic.setOptions html gpuMatrix html gpuSapply html gpuSapply.getOption html internalFunctions html kernel.getOption html ncol-gpuMatrix-method html no_copy_method html printFunctions html subRef html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location No device has been found, please make sure the computer has a graphic card or the driver has been properly installed. Hint: For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively. For GPU, you need to download the graphic driver from your vendor's website. ** testing if installed package can be loaded from final location No device has been found, please make sure the computer has a graphic card or the driver has been properly installed. Hint: For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively. For GPU, you need to download the graphic driver from your vendor's website. ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'gpuMagic' ... ** libs entered "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C_Interface.cpp -o C_Interface.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c R_functionRegistration.cpp -o R_functionRegistration.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Tools.cpp -o Tools.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c kernelManager.cpp -o kernelManager.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.11-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c openArray.cpp -o openArray.o cd ./ICD_loader && mkdir -p ./x64 && /usr/bin/make ./x64/libOpenCL.a \ CC=""C:/rtools40/mingw64/bin/"gcc " CFLAGS=" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign" AR=""C:/rtools40/mingw64/bin/"ar" RM="rm -f" OPENCL_INC="../../inst/include/OpenCL_header" \ ICD_OS=icd_windows make[1]: Entering directory '/c/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpY9igfY/R.INSTALL14f847c2931/gpuMagic/src/ICD_loader' make[1]: 'x64/libOpenCL.a' is up to date. make[1]: Leaving directory '/c/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpY9igfY/R.INSTALL14f847c2931/gpuMagic/src/ICD_loader' C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o gpuMagic.dll tmp.def C_Interface.o R_functionRegistration.o Tools.o kernelManager.o openArray.o ./ICD_loader/x64/libOpenCL.a -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/gpuMagic.buildbin-libdir/gpuMagic/libs/x64 ** testing if installed package can be loaded No device has been found, please make sure the computer has a graphic card or the driver has been properly installed. Hint: For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively. For GPU, you need to download the graphic driver from your vendor's website. * MD5 sums packaged installation of 'gpuMagic' as gpuMagic_1.4.0.zip * DONE (gpuMagic)