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INSTALL report for gQTLstats on tokay2

This page was generated on 2020-10-17 11:56:45 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE gQTLstats PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 768/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gQTLstats 1.20.0
VJ Carey
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/gQTLstats
Branch: RELEASE_3_11
Last Commit: 76f19c8
Last Changed Date: 2020-04-27 14:45:48 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: gQTLstats
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/gQTLstats_1.20.0.tar.gz && rm -rf gQTLstats.buildbin-libdir && mkdir gQTLstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gQTLstats.buildbin-libdir gQTLstats_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL gQTLstats_1.20.0.zip && rm gQTLstats_1.20.0.tar.gz gQTLstats_1.20.0.zip
StartedAt: 2020-10-16 19:30:16 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:32:47 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 150.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/gQTLstats_1.20.0.tar.gz && rm -rf gQTLstats.buildbin-libdir && mkdir gQTLstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gQTLstats.buildbin-libdir gQTLstats_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL gQTLstats_1.20.0.zip && rm gQTLstats_1.20.0.tar.gz gQTLstats_1.20.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  3 62.6M    3 2288k    0     0  4863k      0  0:00:13 --:--:--  0:00:13 4920k
 57 62.6M   57 36.2M    0     0  23.5M      0  0:00:02  0:00:01  0:00:01 23.6M
 84 62.6M   84 52.9M    0     0  21.4M      0  0:00:02  0:00:02 --:--:-- 21.4M
100 62.6M  100 62.6M    0     0  22.4M      0  0:00:02  0:00:02 --:--:-- 22.4M

install for i386

* installing *source* package 'gQTLstats' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gQTLstats'
    finding HTML links ... done
    FDRsupp-class                           html  
    TransStore-class                        html  
    finding level-2 HTML links ... done

    TransStore                              html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmpo3WcQB/R.INSTALLc904cd26352/gQTLstats/man/TransStore.Rd:18: file link 'Registry' in package 'BatchJobs' does not exist and so has been treated as a topic
    cisAssoc                                html  
    clipPCs                                 html  
    directPlot                              html  
    enumerateByFDR                          html  
    eqBox2                                  html  
    filtFDR                                 html  
    gQTLs                                   html  
    gQTLstats-package                       html  
    hmm878                                  html  
    manhWngr                                html  
    mixedVCFtoSnpMatrix                     html  
    pifdr                                   html  
    qqStore                                 html  
    queryVCF                                html  
    senstab                                 html  
    setFDRfunc                              html  
    storeToStats                            html  
    tqbrowser                               html  
    transAssoc                              html  
    transBrowse                             html  
    tsByRank                                html  
    txsPlot                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gQTLstats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gQTLstats' as gQTLstats_1.20.0.zip
* DONE (gQTLstats)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'gQTLstats' successfully unpacked and MD5 sums checked