| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:54:43 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE epiNEM PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 554/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| epiNEM 1.12.0 Martin Pirkl
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | [ ERROR ] | skipped | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
| Package: epiNEM |
| Version: 1.12.0 |
| Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epiNEM |
| StartedAt: 2020-10-16 19:03:34 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:05:21 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 107.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epiNEM ### ############################################################################## ############################################################################## * checking for file ‘epiNEM/DESCRIPTION’ ... OK * preparing ‘epiNEM’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘epiNEM.Rmd’ using rmarkdown Registered S3 methods overwritten by 'RcppEigen': method from predict.fastLm RcppArmadillo print.fastLm RcppArmadillo summary.fastLm RcppArmadillo print.summary.fastLm RcppArmadillo Registered S3 method overwritten by 'gplots': method from reorder.factor gdata Quitting from lines 266-349 (epiNEM.Rmd) Error: processing vignette 'epiNEM.Rmd' failed with diagnostics: cannot open the connection to 'https://string-db.org/api/tsv-no-header/version' --- failed re-building ‘epiNEM.Rmd’ SUMMARY: processing the following file failed: ‘epiNEM.Rmd’ Error: Vignette re-building failed. Execution halted