Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:38 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE Rhdf5lib PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1484/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Rhdf5lib 1.10.1 Mike Smith
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: Rhdf5lib |
Version: 1.10.1 |
Command: rm -rf Rhdf5lib.buildbin-libdir && mkdir Rhdf5lib.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Rhdf5lib.buildbin-libdir Rhdf5lib_1.10.1.tar.gz |
StartedAt: 2020-10-17 11:28:15 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 11:28:57 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 42.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: Rhdf5lib_1.10.1.zip |
PackageFileSize: 7.758 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Rhdf5lib.buildbin-libdir && mkdir Rhdf5lib.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Rhdf5lib.buildbin-libdir Rhdf5lib_1.10.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'Rhdf5lib' ... ** using staged installation untarring hdf5_headers_1.10.6.tar.gz ... ** libs mkdir -p "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/i386/" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp "winlib-8.3.0/i386/libhdf5.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/i386/libhdf5.a" cp "winlib-8.3.0/i386/libhdf5_cpp.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/i386/libhdf5_cpp.a" cp "winlib-8.3.0/i386/libhdf5_hl.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/i386/libhdf5_hl.a" cp "winlib-8.3.0/i386/libhdf5_hl_cpp.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/i386/libhdf5_hl_cpp.a" cp "winlib-8.3.0/i386/libszip.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/i386/libszip.a" cp ./hdf5/*.h "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp ./hdf5/c++/*.h "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" cp ./hdf5/hl/*.h "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -I./hdf5 -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rhdf5lib.c -o Rhdf5lib.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o Rhdf5lib.dll tmp.def Rhdf5lib.o winlib-8.3.0//i386/libhdf5.a winlib-8.3.0//i386/libszip.a -lpsapi -lz -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/00LOCK-Rhdf5lib/00new/Rhdf5lib/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Rhdf5lib' finding HTML links ... done Rhdf5lib html getHdf5Version html pkgconfig html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Rhdf5lib' ... untarring hdf5_headers_1.10.6.tar.gz ... ** libs mkdir -p "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/lib/x64/" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/include" cp "winlib-8.3.0/x64/libhdf5.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/lib/x64/libhdf5.a" cp "winlib-8.3.0/x64/libhdf5_cpp.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/lib/x64/libhdf5_cpp.a" cp "winlib-8.3.0/x64/libhdf5_hl.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/lib/x64/libhdf5_hl.a" cp "winlib-8.3.0/x64/libhdf5_hl_cpp.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/lib/x64/libhdf5_hl_cpp.a" cp "winlib-8.3.0/x64/libszip.a" "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/lib/x64/libszip.a" cp ./hdf5/*.h "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/include" cp ./hdf5/c++/*.h "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/include" cp ./hdf5/hl/*.h "C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/include" "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -I./hdf5 -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rhdf5lib.c -o Rhdf5lib.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o Rhdf5lib.dll tmp.def Rhdf5lib.o winlib-8.3.0//x64/libhdf5.a winlib-8.3.0//x64/libszip.a -lpsapi -lz -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/Rhdf5lib.buildbin-libdir/Rhdf5lib/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'Rhdf5lib' as Rhdf5lib_1.10.1.zip * DONE (Rhdf5lib)