Ji-Ping Wang
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/NuPoP |
| Branch: RELEASE_3_11 |
| Last Commit: 8e3f31a |
| Last Changed Date: 2020-04-27 14:22:52 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:17 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE NuPoP PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1210/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| NuPoP 1.38.0 Ji-Ping Wang
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: NuPoP |
| Version: 1.38.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/NuPoP_1.38.0.tar.gz && rm -rf NuPoP.buildbin-libdir && mkdir NuPoP.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NuPoP.buildbin-libdir NuPoP_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL NuPoP_1.38.0.zip && rm NuPoP_1.38.0.tar.gz NuPoP_1.38.0.zip |
| StartedAt: 2020-10-16 16:47:57 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 16:48:40 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 43.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/NuPoP_1.38.0.tar.gz && rm -rf NuPoP.buildbin-libdir && mkdir NuPoP.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NuPoP.buildbin-libdir NuPoP_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL NuPoP_1.38.0.zip && rm NuPoP_1.38.0.tar.gz NuPoP_1.38.0.zip
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install for i386
* installing *source* package 'NuPoP' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c vtbfb.f90 -o vtbfb.o
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c vtbfbNL4.f90 -o vtbfbNL4.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o NuPoP.dll tmp.def vtbfb.o vtbfbNL4.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/NuPoP.buildbin-libdir/00LOCK-NuPoP/00new/NuPoP/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'NuPoP'
finding HTML links ... done
NuPoP-package html
plotNuPoP html
predNuPoP html
readNuPoP html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'NuPoP' ...
** libs
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c vtbfb.f90 -o vtbfb.o
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c vtbfbNL4.f90 -o vtbfbNL4.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o NuPoP.dll tmp.def vtbfb.o vtbfbNL4.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/NuPoP.buildbin-libdir/NuPoP/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NuPoP' as NuPoP_1.38.0.zip
* DONE (NuPoP)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'NuPoP' successfully unpacked and MD5 sums checked