Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:39 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE GeneStructureTools PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 693/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
GeneStructureTools 1.8.0 Beth Signal
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: GeneStructureTools |
Version: 1.8.0 |
Command: rm -rf GeneStructureTools.buildbin-libdir && mkdir GeneStructureTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneStructureTools.buildbin-libdir GeneStructureTools_1.8.0.tar.gz |
StartedAt: 2020-10-17 10:36:54 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 10:38:30 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 95.8 seconds |
RetCode: 0 |
Status: OK |
PackageFile: GeneStructureTools_1.8.0.zip |
PackageFileSize: 1.695 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GeneStructureTools.buildbin-libdir && mkdir GeneStructureTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneStructureTools.buildbin-libdir GeneStructureTools_1.8.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'GeneStructureTools' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GeneStructureTools' finding HTML links ... done DEXSeqIdsToGeneIds html UTR2UTR53 html addBroadTypes html addIntronInTranscript html addSets html alternativeIntronUsage html annotateGeneModel html attrChangeAltSpliced html coordinates-methods html cumsumANDpad html diffSplicingResults-methods html exonsToTranscripts html filterGtfOverlap html filterWhippetEvents html findDEXexonType html findExonContainingTranscripts html findIntronContainingTranscripts html findJunctionPairs html formatWhippetEvents html getOrfs html getUOrfs html junctions-methods html leafcutterTranscriptChangeSummary html makeGeneModel html maxLocation html orfDiff html orfSimilarity html overlapTypes html readCounts-methods html readWhippetDIFFfiles html readWhippetDataSet html readWhippetJNCfiles html readWhippetPSIfiles html removeDuplicateTranscripts html removeSameExon html removeVersion html reorderExonNumbers html replaceJunction html skipExonInTranscript html summariseExonTypes html transcriptChangeSummary html whippetDataSet-class html whippetTranscriptChangeSummary html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GeneStructureTools' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GeneStructureTools' as GeneStructureTools_1.8.0.zip * DONE (GeneStructureTools)