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INSTALL report for GGtools on tokay2

This page was generated on 2020-10-17 11:56:41 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE GGtools PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 731/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GGtools 5.24.0
VJ Carey
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/GGtools
Branch: RELEASE_3_11
Last Commit: f9bdba2
Last Changed Date: 2020-04-27 14:13:51 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: GGtools
Version: 5.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GGtools_5.24.0.tar.gz && rm -rf GGtools.buildbin-libdir && mkdir GGtools.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GGtools.buildbin-libdir GGtools_5.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GGtools_5.24.0.zip && rm GGtools_5.24.0.tar.gz GGtools_5.24.0.zip
StartedAt: 2020-10-16 19:35:34 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:39:40 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 245.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GGtools_5.24.0.tar.gz && rm -rf GGtools.buildbin-libdir && mkdir GGtools.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GGtools.buildbin-libdir GGtools_5.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GGtools_5.24.0.zip && rm GGtools_5.24.0.tar.gz GGtools_5.24.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  7 69.2M    7 5392k    0     0  10.0M      0  0:00:06 --:--:--  0:00:06 10.1M
100 69.2M  100 69.2M    0     0  56.0M      0  0:00:01  0:00:01 --:--:-- 56.2M

install for i386

* installing *source* package 'GGtools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GGtools'
    finding HTML links ... done
    All.cis                                 html  
    CisConfig-class                         html  
    finding level-2 HTML links ... done

    EqAppr-class                            html  
    GGtools-package                         html  
    TransConfig-class                       html  
    appraise                                html  
    b1                                      html  
    best.cis.eQTLs                          html  
    best.trans.eQTLs                        html  
    bindmaf                                 html  
    cgff2dt                                 html  
    cisAssoc                                html  
    cisRun-class                            html  
    ciseqByCluster                          html  
    collectBest                             html  
    concatCis                               html  
    eqBox                                   html  
    eqsens_dt                               html  
    eqtlTests                               html  
    eqtlTests.me                            html  
    eqtlTestsManager-class                  html  
    ex                                      html  
    getCisMap                               html  
    gffprocess                              html  
    gwSnpTests                              html  
    hmm878                                  html  
    pifdr                                   html  
    qqhex                                   html  
    richNull                                html  
    sampsInVCF                              html  
    scoresCis                               html  
    sensanal                                html  
    sensiCisInput-class                     html  
    sensiCisOutput-class                    html  
    simpleTiling                            html  
    snplocsDefault                          html  
    strMultPop                              html  
    transManager-class                      html  
    transScores                             html  
    transTab                                html  
    transeqByCluster                        html  
    vcf2sm                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GGtools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GGtools' as GGtools_5.24.0.zip
* DONE (GGtools)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'GGtools' successfully unpacked and MD5 sums checked