Daniel Ellwanger
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/CellTrails |
| Branch: RELEASE_3_11 |
| Last Commit: cc8c1b5 |
| Last Changed Date: 2020-05-10 19:41:47 -0400 (Sun, 10 May 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:13 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE CellTrails PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 256/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CellTrails 1.6.1 Daniel Ellwanger
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: CellTrails |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CellTrails_1.6.1.tar.gz && rm -rf CellTrails.buildbin-libdir && mkdir CellTrails.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellTrails.buildbin-libdir CellTrails_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CellTrails_1.6.1.zip && rm CellTrails_1.6.1.tar.gz CellTrails_1.6.1.zip |
| StartedAt: 2020-10-16 18:04:04 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:07:04 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 179.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CellTrails_1.6.1.tar.gz && rm -rf CellTrails.buildbin-libdir && mkdir CellTrails.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellTrails.buildbin-libdir CellTrails_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CellTrails_1.6.1.zip && rm CellTrails_1.6.1.tar.gz CellTrails_1.6.1.zip
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install for i386
* installing *source* package 'CellTrails' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CellTrails'
finding HTML links ... done
addTrail html
connectStates html
contrastTrailExpr html
dot-adjustLayoutByPtime html
dot-bhtsne html
dot-capitalize html
dot-color_hue html
dot-color_ramp html
dot-connectStates_def html
dot-connect_ordi html
dot-connect_ortho html
dot-contrastExprTrail_def html
dot-deleteMedianCentres html
dot-denoiseExpression html
dot-diffExpr html
dot-diffExprState_def html
dot-embedSamples_def html
dot-exprs html
dot-featureNameExists html
dot-filterTrajFeaturesByCOV_def html
dot-filterTrajFeaturesByDL_def html
dot-filterTrajFeaturesByFF_def html
dot-findSpectrum_def html
dot-findStates_def html
dot-fitDynamic_def html
dot-fitTrajectory_def html
dot-fit_surface html
dot-fr_layout html
dot-generate_ordination html
dot-ihs html
dot-linear_fit html
dot-needsToBeExpanded html
dot-nn_impute html
dot-pca_def html
dot-pheno html
dot-phenoNameExists html
dot-plotDynamic html
dot-plotManifold_def html
dot-plotSpectrum_def html
dot-plotStateExpression_def html
dot-plotStateSize_def html
dot-plotStateTrajectory_def html
dot-plotTrail_def html
dot-plotTrailblazing_def html
dot-plot_trajectoryFit html
dot-prettyColorRamp html
dot-prettyString html
dot-project_ortho html
dot-rbf html
dot-rescale html
dot-sampleNameExists html
dot-spanForest-set html
dot-spanForest html
dot-spatmed html
dot-stateTrajLayout html
dot-trailNameExists html
dot-trajGraph-set html
dot-trajGraph html
dot-trajLandmark-set html
dot-trajLandmark html
dot-trajResiduals-set html
dot-useFeature-set html
dot-useFeature html
dot-useSample-set html
dot-useSample html
dot-validatePlotParams html
dot-write_ygraphml_def html
embedSamples html
enrichment.test html
exSCE html
featureNames-SingleCellExperiment-method
html
filterTrajFeaturesByCOV html
filterTrajFeaturesByDL html
filterTrajFeaturesByFF html
findSpectrum html
findStates html
fitDynamic html
fitTrajectory html
landmarks html
latentSpace-set html
latentSpace html
manifold2D-set html
manifold2D html
pca html
phenoNames html
plotDynamic html
plotManifold html
plotMap html
plotStateExpression html
plotStateSize html
plotStateTrajectory html
plotTrail html
plotTrajectoryFit html
read.ygraphml html
removeTrail html
sampleNames-SingleCellExperiment-method
html
selectTrajectory html
showTrajInfo html
simulate_exprs html
stateTrajLayout-set html
states-set html
states html
trailNames-set html
trailNames html
trails html
trajComponents html
trajFeatureNames-set html
trajFeatureNames html
trajLayout-set html
trajLayout html
trajResiduals html
trajSampleNames html
userLandmarks-set html
userLandmarks html
write.ygraphml html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CellTrails' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CellTrails' as CellTrails_1.6.1.zip
* DONE (CellTrails)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'CellTrails' successfully unpacked and MD5 sums checked