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INSTALL report for CVE on tokay2

This page was generated on 2020-10-17 11:56:24 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE CVE PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 408/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CVE 1.14.0
Andreas Mock
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/CVE
Branch: RELEASE_3_11
Last Commit: 31cf4ab
Last Changed Date: 2020-04-27 15:00:18 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: CVE
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CVE_1.14.0.tar.gz && rm -rf CVE.buildbin-libdir && mkdir CVE.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CVE.buildbin-libdir CVE_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CVE_1.14.0.zip && rm CVE_1.14.0.tar.gz CVE_1.14.0.zip
StartedAt: 2020-10-16 19:09:58 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:10:48 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 50.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/CVE_1.14.0.tar.gz && rm -rf CVE.buildbin-libdir && mkdir CVE.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CVE.buildbin-libdir CVE_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL CVE_1.14.0.zip && rm CVE_1.14.0.tar.gz CVE_1.14.0.zip
###
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100 4218k  100 4218k    0     0  19.6M      0 --:--:-- --:--:-- --:--:-- 20.1M

install for i386

* installing *source* package 'CVE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CVE'
    finding HTML links ... done
    GS_UV                                   html  
    GS_Vem                                  html  
    GS_lscore                               html  
    GS_pmet                                 html  
    GS_survival                             html  
    METree_GO                               html  
    MM                                      html  
    MS_UV                                   html  
    MS_UV_bar                               html  
    MS_Vem_bar                              html  
    MS_lscore                               html  
    MS_lscore_bar                           html  
    MS_pmet                                 html  
    MS_pmet_bar                             html  
    MS_survival                             html  
    MS_survival_bar                         html  
    MS_vem                                  html  
    crcCase                                 html  
    genes_WGCNA                             html  
    get.oncotator.anno                      html  
    label_order                             html  
    melanomaCase                            html  
    modules                                 html  
    openCVE                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'CVE' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'CVE' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CVE' ...
** testing if installed package can be loaded
Warning: Package 'CVE' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'CVE' as CVE_1.14.0.zip
* DONE (CVE)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'CVE' successfully unpacked and MD5 sums checked