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This page was generated on 2020-04-15 12:22:46 -0400 (Wed, 15 Apr 2020).
| Package 1515/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| sapFinder 1.24.0 Shaohang Xu 
 | malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] |  | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | ERROR | ERROR | skipped | skipped | 
| Package: sapFinder | 
| Version: 1.24.0 | 
| Command: rm -rf sapFinder.buildbin-libdir && mkdir sapFinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sapFinder.buildbin-libdir sapFinder_1.24.0.tar.gz | 
| StartedAt: 2020-04-15 09:37:27 -0400 (Wed, 15 Apr 2020) | 
| EndedAt: 2020-04-15 09:37:58 -0400 (Wed, 15 Apr 2020) | 
| EllapsedTime: 31.3 seconds | 
| RetCode: 0 | 
| Status: OK | 
| PackageFile: sapFinder_1.24.0.zip | 
| PackageFileSize: 4.903 MiB | 
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### Running command:
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###   rm -rf sapFinder.buildbin-libdir && mkdir sapFinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sapFinder.buildbin-libdir sapFinder_1.24.0.tar.gz
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install for i386
* installing *source* package 'sapFinder' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c dataHandle.cpp -o dataHandle.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o sapFinder.dll tmp.def dataHandle.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/sapFinder.buildbin-libdir/00LOCK-sapFinder/00new/sapFinder/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'sapFinder'
    finding HTML links ... done
    dbCreator                               html  
    easyRun                                 html  
    parserGear                              html  
    reportCreator                           html  
    runTandem                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'sapFinder' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c dataHandle.cpp -o dataHandle.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o sapFinder.dll tmp.def dataHandle.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/sapFinder.buildbin-libdir/sapFinder/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sapFinder' as sapFinder_1.24.0.zip
* DONE (sapFinder)