Qian Liu
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/VariantExperiment |
| Branch: RELEASE_3_10 |
| Last Commit: 540e1d8 |
| Last Changed Date: 2019-10-29 13:11:55 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:32:58 -0400 (Wed, 15 Apr 2020).
| Package 1785/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| VariantExperiment 1.0.0 Qian Liu
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: VariantExperiment |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/VariantExperiment_1.0.0.tar.gz && rm -rf VariantExperiment.buildbin-libdir && mkdir VariantExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VariantExperiment.buildbin-libdir VariantExperiment_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL VariantExperiment_1.0.0.zip && rm VariantExperiment_1.0.0.tar.gz VariantExperiment_1.0.0.zip |
| StartedAt: 2020-04-14 20:15:02 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:16:08 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 66.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/VariantExperiment_1.0.0.tar.gz && rm -rf VariantExperiment.buildbin-libdir && mkdir VariantExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=VariantExperiment.buildbin-libdir VariantExperiment_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL VariantExperiment_1.0.0.zip && rm VariantExperiment_1.0.0.tar.gz VariantExperiment_1.0.0.zip
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install for i386
* installing *source* package 'VariantExperiment' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'seqAlleleFreq' in package 'VariantExperiment'
Creating a new generic function for 'seqAlleleCount' in package 'VariantExperiment'
Creating a new generic function for 'seqMissing' in package 'VariantExperiment'
** help
*** installing help indices
converting help for package 'VariantExperiment'
finding HTML links ... done
VariantExperiment-class html
VariantExperiment-methods html
VariantExperiment-package html
loadVariantExperiment html
makeVariantExperimentFromGDS html
makeVariantExperimentFromVCF html
saveVariantExperiment html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'VariantExperiment' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'VariantExperiment' as VariantExperiment_1.0.0.zip
* DONE (VariantExperiment)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'VariantExperiment' successfully unpacked and MD5 sums checked