Steffen Durinck
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/GenomeGraphs |
| Branch: RELEASE_3_10 |
| Last Commit: 8104468 |
| Last Changed Date: 2019-10-29 13:07:55 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:18:21 -0400 (Wed, 15 Apr 2020).
| Package 675/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Steffen Durinck
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: GenomeGraphs |
| Version: 1.46.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/GenomeGraphs_1.46.0.tar.gz && rm -rf GenomeGraphs.buildbin-libdir && mkdir GenomeGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeGraphs.buildbin-libdir GenomeGraphs_1.46.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL GenomeGraphs_1.46.0.zip && rm GenomeGraphs_1.46.0.tar.gz GenomeGraphs_1.46.0.zip |
| StartedAt: 2020-04-14 19:23:14 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:23:45 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 30.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/GenomeGraphs_1.46.0.tar.gz && rm -rf GenomeGraphs.buildbin-libdir && mkdir GenomeGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeGraphs.buildbin-libdir GenomeGraphs_1.46.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL GenomeGraphs_1.46.0.zip && rm GenomeGraphs_1.46.0.tar.gz GenomeGraphs_1.46.0.zip
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install for i386
* installing *source* package 'GenomeGraphs' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GenomeGraphs'
finding HTML links ... done
AnnotationTrack-class html
BaseTrack-class html
DisplayPars-class html
DisplayPars html
ExonArray-class html
Gene-class html
GeneModel-class html
GeneRegion-class html
GenericArray-class html
GenomeAxis-class html
HighlightRegion-class html
Ideogram-class html
ImplementsTrackOverlay-class html
Legend-class html
MappedRead-class html
Overlay-class html
RectangleOverlay-class html
Segmentation-class html
Smoothing-class html
TextOverlay-class html
Title-class html
TrackOverlay-class html
Transcript-class html
TranscriptRegion-class html
cn html
drawGD html
drawTrackOverlay-methods html
exonProbePos html
gdObject-class html
gdPlot html
geneBiomart html
geneRegionBiomart html
getGenomicRange html
getPar html
getSize html
ideogramTab html
intensity html
makeAnnotationTrack html
makeBaseTrack html
makeExonArray html
makeGene html
makeGeneModel html
makeGeneRegion html
makeGenericArray html
makeGenomeAxis html
makeIdeogram html
makeLegend html
makeRectangleOverlay html
makeSegmentation html
makeSmoothing html
makeTextOverlay html
makeTitle html
makeTranscript html
probestart html
segEnd html
segStart html
segments html
seqDataEx html
setPar html
showDisplayOptions html
unrData html
unrNProbes html
unrPositions html
yeastCons1 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
** testing if installed package can be loaded from final location
Warning: Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GenomeGraphs' ...
** testing if installed package can be loaded
Warning: Package 'GenomeGraphs' is deprecated and will be removed from
Bioconductor version 3.11
* MD5 sums
packaged installation of 'GenomeGraphs' as GenomeGraphs_1.46.0.zip
* DONE (GenomeGraphs)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'GenomeGraphs' successfully unpacked and MD5 sums checked