Package: DEDS

Version: 1.60.0

Command: rm -rf DEDS.buildbin-libdir && mkdir DEDS.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEDS.buildbin-libdir DEDS_1.60.0.tar.gz

StartedAt: 2020-04-15 08:33:01 -0400 (Wed, 15 Apr 2020)

EndedAt: 2020-04-15 08:33:32 -0400 (Wed, 15 Apr 2020)

EllapsedTime: 30.9 seconds

RetCode: 0

Status:  OK

PackageFile: DEDS_1.60.0.zip

PackageFileSize: 3.606 MiB

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf DEDS.buildbin-libdir && mkdir DEDS.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEDS.buildbin-libdir DEDS_1.60.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'DEDS' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c deds.c -o deds.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c distance.c -o distance.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c input.c -o input.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c manip.c -o manip.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c random.c -o random.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c sampling.c -o sampling.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c stat_fun.c -o stat_fun.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o DEDS.dll tmp.def deds.o distance.o input.o manip.o random.o sampling.o stat_fun.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/DEDS.buildbin-libdir/00LOCK-DEDS/00new/DEDS/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DEDS'
    finding HTML links ... done
    ApoA1                                   html  
    DEDS-internal                           html  
    affySpikeIn                             html  
    aggregateFun                            html  
    comp.B                                  html  
    comp.F                                  html  
    comp.FC                                 html  
    comp.SAM                                html  
    comp.adjp                               html  
    comp.ebayes                             html  
    comp.fdr                                html  
    comp.modF                               html  
    comp.modt                               html  
    comp.stat                               html  
    comp.t                                  html  
    comp.unadjp                             html  
    deds.chooseTest                         html  
    deds.class                              html  
    deds.genExtra                           html  
    deds.pval                               html  
    deds.stat                               html  
    deds.stat.linkC                         html  
    hist.DEDS                               html  
    pairs.DEDS                              html  
    qqnorm.DEDS                             html  
    topgenes                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DEDS' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c deds.c -o deds.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c distance.c -o distance.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c input.c -o input.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c manip.c -o manip.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c random.c -o random.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c sampling.c -o sampling.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c stat_fun.c -o stat_fun.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o DEDS.dll tmp.def deds.o distance.o input.o manip.o random.o sampling.o stat_fun.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/DEDS.buildbin-libdir/DEDS/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEDS' as DEDS_1.60.0.zip
* DONE (DEDS)