| Back to Multiple platform build/check report for BioC 3.10 | 
 | 
This page was generated on 2020-04-15 12:23:24 -0400 (Wed, 15 Apr 2020).
| Package 295/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ClassifyR 2.6.1 Dario Strbenac 
 | malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |  | 
| Package: ClassifyR | 
| Version: 2.6.1 | 
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/ClassifyR_2.6.1.tar.gz && rm -rf ClassifyR.buildbin-libdir && mkdir ClassifyR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ClassifyR.buildbin-libdir ClassifyR_2.6.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL ClassifyR_2.6.1.zip && rm ClassifyR_2.6.1.tar.gz ClassifyR_2.6.1.zip | 
| StartedAt: 2020-04-14 20:10:53 -0400 (Tue, 14 Apr 2020) | 
| EndedAt: 2020-04-14 20:12:58 -0400 (Tue, 14 Apr 2020) | 
| EllapsedTime: 125.4 seconds | 
| RetCode: 0 | 
| Status: OK | 
##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/ClassifyR_2.6.1.tar.gz && rm -rf ClassifyR.buildbin-libdir && mkdir ClassifyR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ClassifyR.buildbin-libdir ClassifyR_2.6.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL ClassifyR_2.6.1.zip && rm ClassifyR_2.6.1.tar.gz ClassifyR_2.6.1.zip
###
##############################################################################
##############################################################################
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1008k  100 1008k    0     0  6239k      0 --:--:-- --:--:-- --:--:-- 6385k
install for i386
* installing *source* package 'ClassifyR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ClassifyR'
    finding HTML links ... done
    ClassifyResult-class                    html  
    finding level-2 HTML links ... done
    DLDAinterface                           html  
    DMDselection                            html  
    EasyHardClassifier-class                html  
    FeatureSetCollection-class              html  
    FeatureSetCollectionOrNULL-class        html  
    KolmogorovSmirnovSelection              html  
    KullbackLeiblerSelection                html  
    MixModelsListsSet-class                 html  
    NSCpredictInterface                     html  
    NSCselectionInterface                   html  
    NSCtrainInterface                       html  
    PredictParams-class                     html  
    ROCplot                                 html  
    ResubstituteParams-class                html  
    SVMinterface                            html  
    SelectParams-class                      html  
    SelectResult-class                      html  
    TrainParams-class                       html  
    TransformParams-class                   html  
    asthmaDataset                           html  
    bartlettSelection                       html  
    calcPerformance                         html  
    characterOrDataFrame-class              html  
    classifyInterface                       html  
    differentMeansSelection                 html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmps1clUt/R.INSTALL27d824447e8f/ClassifyR/man/differentMeansSelection.Rd:40: file link 'rowttests' in package 'genefilter' does not exist and so has been treated as a topic
    distribution                            html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmps1clUt/R.INSTALL27d824447e8f/ClassifyR/man/distribution.Rd:32: file link 'stat_density' in package 'ggplot2' does not exist and so has been treated as a topic
    dlda-class                              html  
    easyHardClassifier                      html  
    easyHardFeatures                        html  
    edgeRselection                          html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmps1clUt/R.INSTALL27d824447e8f/ClassifyR/man/edgeRselection.Rd:45: file link 'edgeR' in package 'edgeR' does not exist and so has been treated as a topic
    edgesToHubNetworks                      html  
    elasticNetFeatures                      html  
    elasticNetGLMinterface                  html  
    featureSetSummary                       html  
    fisherDiscriminant                      html  
    forestFeatures                          html  
    functionOrList-class                    html  
    functionOrNULL-class                    html  
    getLocationsAndScales                   html  
    integerOrNumeric-class                  html  
    interactorDifferences                   html  
    kTSPclassifier                          html  
    knnInterface                            html  
    leveneSelection                         html  
    likelihoodRatioSelection                html  
    limmaSelection                          html  
    listOrCharacterOrNULL-class             html  
    listOrNULL-class                        html  
    mixmodels                               html  
    multnet-class                           html  
    naiveBayesKernel                        html  
    networkCorrelationsSelection            html  
    pairsDifferencesSelection               html  
    pamrtrained-class                       html  
    performancePlot                         html  
    plotFeatureClasses                      html  
    previousSelection                       html  
    previousTrained                         html  
    randomForest-class                      html  
    randomForestInterface                   html  
    rankingPlot                             html  
    runTest                                 html  
    runTests                                html  
    samplesMetricMap                        html  
    selectionPlot                           html  
    subtractFromLocation                    html  
    svm-class                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ClassifyR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ClassifyR' as ClassifyR_2.6.1.zip
* DONE (ClassifyR)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'ClassifyR' successfully unpacked and MD5 sums checked