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BioC 3.0: BUILD BIN report for Rariant on oaxaca

This page was generated on 2015-04-10 10:08:49 -0700 (Fri, 10 Apr 2015).

Package 716/933HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rariant 1.2.0
Julian Gehring
Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/Rariant
Last Changed Rev: 95439 / Revision: 102249
Last Changed Date: 2014-10-13 14:38:33 -0700 (Mon, 13 Oct 2014)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  NotNeeded  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK [ OK ]

Summary

Package: Rariant
Version: 1.2.0
Command: rm -rf Rariant.buildbin-libdir && mkdir Rariant.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Rariant_1.2.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R Rariant.buildbin-libdir
StartedAt: 2015-04-10 04:51:45 -0700 (Fri, 10 Apr 2015)
EndedAt: 2015-04-10 04:52:32 -0700 (Fri, 10 Apr 2015)
EllapsedTime: 47.0 seconds
RetCode: 0
Status:  OK 
PackageFile: Rariant_1.2.0.tgz
PackageFileSize: 7.267 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf Rariant.buildbin-libdir && mkdir Rariant.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Rariant_1.2.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R Rariant.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=Rariant.buildbin-libdir Rariant_1.2.0.tar.gz'
>>>>>>> 

* installing *source* package ‘Rariant’ ...
** R
** inst
** byte-compile and prepare package for lazy loading
Note: the specification for S3 class “AsIs” in package ‘RJSONIO’ seems equivalent to one from package ‘BiocGenerics’: not turning on duplicate class definitions for this class.
Warning: replacing previous import by ‘proxy::as.matrix’ when loading ‘SomaticSignatures’
Note: the specification for S3 class “cluster” in package ‘NMF’ seems equivalent to one from package ‘BiocParallel’: not turning on duplicate class definitions for this class.
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Note: the specification for S3 class “AsIs” in package ‘RJSONIO’ seems equivalent to one from package ‘BiocGenerics’: not turning on duplicate class definitions for this class.
Warning: replacing previous import by ‘proxy::as.matrix’ when loading ‘SomaticSignatures’
Note: the specification for S3 class “cluster” in package ‘NMF’ seems equivalent to one from package ‘BiocParallel’: not turning on duplicate class definitions for this class.
* DONE (Rariant)