SNPRelate 1.0.1
Xiuwen Zheng
| Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/SNPRelate | | Last Changed Rev: 98473 / Revision: 102249 | | Last Changed Date: 2015-01-19 13:26:19 -0800 (Mon, 19 Jan 2015) |
| zin1 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | [ OK ] | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK | OK |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK | OK |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK |
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### Running command:
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### /home/biocbuild/bbs-3.0-bioc/R/bin/R CMD INSTALL SNPRelate
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* installing to library ‘/home/biocbuild/bbs-3.0-bioc/R/library’
* installing *source* package ‘SNPRelate’ ...
** libs
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c ConvToGDS.cpp -o ConvToGDS.o
gcc -std=gnu99 -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c R_SNPRelate.c -o R_SNPRelate.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c SNPRelate.cpp -o SNPRelate.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c dGenGWAS.cpp -o dGenGWAS.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c dVect.cpp -o dVect.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c genIBD.cpp -o genIBD.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c genIBS.cpp -o genIBS.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c genKING.cpp -o genKING.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c genLD.cpp -o genLD.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG -DUSING_R -I. -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/gdsfmt/include" -fpic -g -O2 -Wall -c genPCA.cpp -o genPCA.o
g++ -shared -L/home/biocbuild/bbs-3.0-bioc/R/lib -L/usr/local/lib -o SNPRelate.so ConvToGDS.o R_SNPRelate.o SNPRelate.o dGenGWAS.o dVect.o genIBD.o genIBS.o genKING.o genLD.o genPCA.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.0-bioc/R/lib -lRblas -L/home/biocbuild/bbs-3.0-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.0-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.0-bioc/R/library/SNPRelate/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (SNPRelate)