Package: altcdfenvs

Version: 2.16.0

Command: rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh altcdfenvs_2.16.0.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R altcdfenvs.buildbin-libdir

StartedAt: 2012-03-24 05:03:16 -0700 (Sat, 24 Mar 2012)

EndedAt: 2012-03-24 05:03:33 -0700 (Sat, 24 Mar 2012)

EllapsedTime: 17.4 seconds

RetCode: 0

Status:  OK

PackageFile: altcdfenvs_2.16.0.tgz

PackageFileSize: 514.9 KiB

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=altcdfenvs.buildbin-libdir altcdfenvs_2.16.0.tar.gz'
>>>>>>> 

* installing *source* package 'altcdfenvs' ...
** R
** data
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
in method for 'toHypergraph' with signature '"CdfEnvAffy"': no definition for class "CdfEnvAffy"
Creating a generic function for 'plot' from package 'graphics' in package 'altcdfenvs'
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'altcdfenvs.Rnw' 
   'modify.Rnw' 
   'ngenomeschips.Rnw' 
** testing if installed package can be loaded

* DONE (altcdfenvs)