Package: a4Base

Version: 1.1.3

Command: mkdir a4Base.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh a4Base_1.1.3.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R a4Base.buildbin-libdir

StartedAt: 2011-06-22 05:57:59 -0700 (Wed, 22 Jun 2011)

EndedAt: 2011-06-22 05:58:33 -0700 (Wed, 22 Jun 2011)

EllapsedTime: 33.9 seconds

RetCode: 0

Status:  OK

PackageFile: a4Base_1.1.3.tgz

PackageFileSize: 444.4 KiB

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=a4Base.buildbin-libdir a4Base_1.1.3.tar.gz'
>>>>>>> 

* installing *source* package ‘a4Base’ ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: GO.db
Loading required package: DBI

Loading required package: KEGG.db

Loading required package: MASS
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009

mpm version 1.0-17


Attaching package: ‘genefilter’

The following object(s) are masked from ‘package:MASS’:

    area

Loading required package: Matrix
Loading required package: lattice

Attaching package: ‘Matrix’

The following object(s) are masked from ‘package:base’:

    det

Loaded glmnet 1.7 

Attaching package: ‘a4Core’

The following object(s) are masked from ‘package:limma’:

    topTable

Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: ‘gdata’

The following object(s) are masked from ‘package:Biobase’:

    combine

The following object(s) are masked from ‘package:stats’:

    nobs

The following object(s) are masked from ‘package:utils’:

    object.size

Loading required package: caTools
Loading required package: bitops

Attaching package: ‘gplots’

The following object(s) are masked from ‘package:multtest’:

    wapply

The following object(s) are masked from ‘package:stats’:

    lowess

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

mpm version 1.0-17

Loaded glmnet 1.7 

a4Base version 1.1.3


* DONE (a4Base)