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Package 466/479HostnameOS / ArchBUILDCHECKBUILD BIN
VanillaICE 1.15.0
Robert Scharpf
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/VanillaICE
Last Changed Rev: 54810 / Revision: 56603
Last Changed Date: 2011-04-13 18:14:51 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: VanillaICE
Version: 1.15.0
Command: mkdir VanillaICE.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=VanillaICE.buildbin-libdir VanillaICE_1.15.0.tar.gz
StartedAt: 2011-07-07 07:18:42 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 07:19:20 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 37.8 seconds
RetCode: 0
Status:  OK  
PackageFile: VanillaICE_1.15.0.zip
PackageFileSize: 2.026 MiB

Command output


install for i386

* installing *source* package 'VanillaICE' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c viterbi.c -o viterbi.o
viterbi.c: In function 'viterbi':
viterbi.c:61:34: warning: unused variable 'tp'
gcc -shared -s -static-libgcc -o VanillaICE.dll tmp.def viterbi.o -lm -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/VanillaICE.buildbin-libdir/VanillaICE/libs/i386
** R
** data
** inst
** preparing package for lazy loading

Attaching package: 'IRanges'

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.


Attaching package: 'Biobase'

The following object(s) are masked from 'package:IRanges':

    updateObject

================================================================================
Welcome to oligoClasses version 1.15.9
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
     - Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load 'snow'
     - Use options(cluster=makeCluster(...))
================================================================================
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'VanillaICE.Rnw' 
** testing if installed package can be loaded
================================================================================
Welcome to oligoClasses version 1.15.9
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
     - Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load 'snow'
     - Use options(cluster=makeCluster(...))
================================================================================
Welcome to VanillaICE version 1.15.0

add DLL for x64

* installing *source* package 'VanillaICE' ...
** libs
x86_64-w64-mingw32-gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -std=gnu99 -mtune=core2 -c viterbi.c -o viterbi.o
viterbi.c: In function 'viterbi':
viterbi.c:61:34: warning: unused variable 'tp'
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o VanillaICE.dll tmp.def viterbi.o -lm -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/VanillaICE.buildbin-libdir/VanillaICE/libs/x64
** testing if installed package can be loaded
================================================================================
Welcome to oligoClasses version 1.15.9
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
     - Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
     - Load 'ff'
     - Load 'snow'
     - Use options(cluster=makeCluster(...))
================================================================================
Welcome to VanillaICE version 1.15.0
* MD5 sums
packaged installation of 'VanillaICE' as VanillaICE_1.15.0.zip

* DONE (VanillaICE)