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Package 76/462HostnameOS / ArchBUILDCHECKBUILD BIN
Category 2.19.1
Biocore Team c/o BioC user list
Snapshot Date: 2011-05-09 07:20:56 -0700 (Mon, 09 May 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Category
Last Changed Rev: 55298 / Revision: 55359
Last Changed Date: 2011-05-06 04:33:28 -0700 (Fri, 06 May 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386 [ ERROR ] skipped  skipped 

Summary

Package: Category
Version: 2.19.1
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data Category
StartedAt: 2011-05-09 10:29:41 -0700 (Mon, 09 May 2011)
EndedAt: 2011-05-09 10:30:31 -0700 (Mon, 09 May 2011)
EllapsedTime: 50.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file ‘Category/DESCRIPTION’ ... OK
* preparing ‘Category’:
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  ‘browseVignettes()’. To cite Bioconductor, see
  ‘citation("Biobase")’ and for packages ‘citation("pkgname")’.

Loading required package: AnnotationDbi
Loading required package: org.Hs.eg.db
Loading required package: DBI



Loading required package: lattice

Error: processing vignette ‘ChromBand.Rnw’ failed with diagnostics:
 chunk 3 (label = chr12ideogram) 
Error in plotCytoband2(chromosome = "12", cyt2, outer = FALSE, cex.axis = 0.6,  : 
  could not find function "chromosomeSize"
Execution halted