Package: BeadDataPackR

Version: 1.5.0

Command: D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings BeadDataPackR_1.5.0.tar.gz

StartedAt: 2011-05-09 15:06:05 -0700 (Mon, 09 May 2011)

EndedAt: 2011-05-09 15:07:22 -0700 (Mon, 09 May 2011)

EllapsedTime: 77.3 seconds

RetCode: 0

Status:  OK

CheckDir: BeadDataPackR.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/BeadDataPackR.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-04-17 r55484)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'BeadDataPackR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'BeadDataPackR' version '1.5.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'BeadDataPackR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'BeadDataPackR' ...
** libs
x86_64-w64-mingw32-gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -std=gnu99 -c BeadDataPackR.c -o BeadDataPackR.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -std=gnu99 -c R_init_BeadDataPackR.c -o R_init_BeadDataPackR.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o BeadDataPackR.dll tmp.def BeadDataPackR.o R_init_BeadDataPackR.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/BeadDataPackR.Rcheck/BeadDataPackR/libs/x64
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'BeadDataPackR.rnw' 
** testing if installed package can be loaded

* DONE (BeadDataPackR)

name	user	system	elapsed
compressBeadData	0.06	0.00	0.28
decompressBeadData	0.05	0.00	0.06
extractLocsFile	0.01	0.00	0.02
readCompressedData	0.02	0.00	0.01