Ringo 1.16.0
J. Toedling
| Snapshot Date: 2011-10-20 07:20:33 -0700 (Thu, 20 Oct 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_8/madman/Rpacks/Ringo | | Last Changed Rev: 54808 / Revision: 59457 | | Last Changed Date: 2011-04-13 18:03:42 -0700 (Wed, 13 Apr 2011) |
| lamb1 | Linux (openSUSE 11.3) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | [ ERROR ] | skipped | skipped |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'Ringo/DESCRIPTION' ... OK
* preparing 'Ringo':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation("pkgname")'.
Loading required package: RColorBrewer
Loading required package: limma
Loading required package: Matrix
Loading required package: lattice
Attaching package: 'Matrix'
The following object(s) are masked from 'package:base':
det
Loading required package: grid
Lag: 0 ... 100 ... 200 ... 300 ... 400 ... 500 ... 600 ... 700 ... 800 ... 900 ... 1000 ...
Computing correlation...KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Warning in extractProbeAnno(RG, "agilent", genome = "mouse", microarray = "Agilent Tiling Chr17") :
Some reporters had no or an unrecognized genome position in RG$genes$SystematicName.
Loading required package: mclust
pdflatex Ringo
This is pdfTeX, Version 3.1415926-1.40.11 (MiKTeX 2.9)
entering extended mode
(D:\biocbld\bbs-2.8-bioc\tmpdir\RtmpNYukcX\Rbuild4b868e2\Ringo\inst\doc\Ringo.t
ex
LaTeX2e <2009/09/24>
Babel <v3.8l> and hyphenation patterns for english, afrikaans, ancientgreek, ar
abic, armenian, assamese, basque, bengali, bokmal, bulgarian, catalan, coptic,
croatian, czech, danish, dutch, esperanto, estonian, farsi, finnish, french, ga
lician, german, german-x-2009-06-19, greek, gujarati, hindi, hungarian, iceland
ic, indonesian, interlingua, irish, italian, kannada, kurmanji, lao, latin, lat
vian, lithuanian, malayalam, marathi, mongolian, mongolianlmc, monogreek, ngerm
an, ngerman-x-2009-06-19, nynorsk, oriya, panjabi, pinyin, polish, portuguese,
romanian, russian, sanskrit, serbian, slovak, slovenian, spanish, swedish, swis
sgerman, tamil, telugu, turkish, turkmen, ukenglish, ukrainian, uppersorbian, u
senglishmax, welsh, loaded.
pdflatex.exe: Windows API error 5: Access is denied.
pdflatex.exe: Data: cprogramdatamiktex2.9miktexdatale1756f6ade37d5f870f23c05a7f81e257.fndb
make: *** [pdf] Error 1
Error in tools::buildVignettes(dir = ".") : running 'make' failed
Execution halted