Package: OLIN

Version: 1.29.1

Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch OLIN_1.29.1.tar.gz

StartedAt: 2011-02-24 20:35:50 -0800 (Thu, 24 Feb 2011)

EndedAt: 2011-02-24 20:37:48 -0800 (Thu, 24 Feb 2011)

EllapsedTime: 118.3 seconds

RetCode: 0

Status:  OK

CheckDir: OLIN.Rcheck

Warnings: 0

* using log directory ‘/Users/biocbuild/bbs-2.8-bioc/meat/OLIN.Rcheck’
* using R version 2.13.0 Under development (unstable) (2011-01-10 r53950)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘OLIN/DESCRIPTION’ ... OK
* this is package ‘OLIN’ version ‘1.29.1’
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘OLIN’ can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in ‘inst/doc’ ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package ‘OLIN’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: akima
Loading required package: lattice
locfit 1.5-6 	 2010-01-20 
Loading required package: limma
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (OLIN)

name	user	system	elapsed
anovaint	0.338	0.057	0.398
anovapin	0.287	0.048	0.336
anovaplate	0.261	0.055	0.318
anovaspatial	0.614	0.116	0.736
backgroundCorrect2	0.761	0.181	0.944
bas	0.080	0.015	0.095
colorbar.mxy	0.098	0.020	0.118
fdr.int	0	0	0
fdr.int2	0.000	0.001	0.000
fdr.spatial	0.000	0.000	0.001
fdr.spatial2	0.000	0.000	0.001
fgbg.visu	0.194	0.035	0.256
ino	0.486	0.138	0.659
lin	1.762	0.379	2.157
m2v	0.118	0.025	0.143
ma.matrix	0.671	0.030	0.706
ma.vector	0.852	0.042	0.902
mxy.abs.plot	0.154	0.026	0.190
mxy.plot	0.202	0.042	0.244
mxy2.plot	0.116	0.020	0.141
oin	2.372	0.419	2.812
olin	51.263	5.284	56.942
p.int	0.000	0.000	0.001
p.int2	0.000	0.000	0.001
p.spatial	0.000	0.001	0.001
p.spatial2	0.000	0.000	0.001
sig.mask	0.000	0.001	0.001
sigint.plot	0.000	0.000	0.001
sigint.plot2	0	0	0
sigxy.plot	0.001	0.001	0.000
sigxy.plot2	0.001	0.000	0.001
v2m	0.076	0.008	0.085