Package: rfcdmin

Version: 1.6.11

Command: /Library/Frameworks/R.framework/Versions/2.12/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch rfcdmin_1.6.11.tar.gz

StartedAt: 2011-02-27 15:07:43 -0800 (Sun, 27 Feb 2011)

EndedAt: 2011-02-27 15:09:40 -0800 (Sun, 27 Feb 2011)

EllapsedTime: 117.7 seconds

RetCode: 0

Status:  OK

CheckDir: rfcdmin.Rcheck

Warnings: 0

* using log directory ‘/Users/biocbuild/bbs-2.7-data-experiment/meat/rfcdmin.Rcheck’
* using R version 2.12.2 Patched (2011-02-25 r54591)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘rfcdmin/DESCRIPTION’ ... OK
* this is package ‘rfcdmin’ version ‘1.6.11’
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘rfcdmin’ can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... NOTE
'library' or 'require' calls not declared from:
  MASS rfcprim
* checking data for non-ASCII characters ... NOTE
  
  *** Deprecation warning ***:
  The package 'rflowcyt' is deprecated and will not be supported after Bioconductor release 2.4. 
      Similar functionality is provided in packages flowCore and flowViz .
  
  
* checking examples ... OK
* checking PDF version of manual ... OK

* installing *source* package ‘rfcdmin’ ...
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (rfcdmin)

name	user	system	elapsed
FCSRobj.currentmin	0.036	0.004	0.041
FCSRobjmin	0.024	0.001	0.026
MC.053min	0.380	0.014	0.395
PRIM.example.data	0.138	0.003	0.140
PRIM.real.data.min	0.045	0.002	0.047
PerPosROCmin	4.618	0.158	4.848
SEB-NP22.fcs	0.002	0.000	0.003
VRCmin	4.113	0.167	4.327
facscan256.fcs	1.040	0.065	1.124
flowcyt.data	5.926	0.221	6.225
flowcyt.fcs	1.118	0.079	1.307
flowcyt.fluors	5.694	0.227	5.965