VanillaICE 1.12.4
Robert Scharpf
| Snapshot Date: 2011-04-06 23:24:01 -0700 (Wed, 06 Apr 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/VanillaICE | | Last Changed Rev: 51962 / Revision: 54588 | | Last Changed Date: 2011-01-18 17:50:31 -0800 (Tue, 18 Jan 2011) |
| lamb2 | Linux (openSUSE 11.2) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | [ OK ] |
* installing *source* package 'VanillaICE' ...
Using auto-selected zip option '--use-zip-data'
** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include" -O2 -Wall -std=gnu99 -c viterbi.c -o viterbi.o
viterbi.c: In function 'viterbi':
viterbi.c:61:34: warning: unused variable 'tp'
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o VanillaICE.dll tmp.def viterbi.o -lm -LD:/biocbld/bbs-2.7-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.7-bioc/meat/VanillaICE.buildbin-libdir/VanillaICE/libs/x64
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: oligoClasses
================================================================================
Welcome to oligoClasses version 1.12.2
================================================================================
Large dataset support for 'oligo/crlmm': Disabled
- Load 'ff'
================================================================================
Parallel computing support for 'oligo/crlmm': Disabled
- Load 'ff'
- Load 'snow'
- Use options(cluster=makeCluster(...))
================================================================================
Loading package bit1.1-6
package:bit (c) 2008/2009 Jens Oehlschlaegel (GPL-2)
creators: bit bitwhich
coercion: as.logical as.integer as.bit as.bitwhich which
operator: ! & | xor != ==
querying: print length any all min max range sum summary
bit access: length<- [ [<- [[ [[<-
for more help type ?bit
Loading package ff2.2-1
- getOption("fftempdir")=="D:/biocbld/bbs-2.7-bioc/tmpdir/Rtmprc6hAb"
- getOption("ffextension")=="ff"
- getOption("ffdrop")==TRUE
- getOption("fffinonexit")==TRUE
- getOption("ffpagesize")==65536
- getOption("ffcaching")=="mmnoflush" -- consider "ffeachflush" if your system stalls on large writes
- getOption("ffbatchbytes")==42928701.44 -- consider a different value for tuning your system
- getOption("ffmaxbytes")==2146435072 -- consider a different value for tuning your system
Welcome to crlmm version 1.8.11
Attaching package: 'IRanges'
The following object(s) are masked from 'package:Biobase':
updateObject
The following object(s) are masked from 'package:base':
Map, cbind, eval, mapply, order, paste, pmax, pmax.int, pmin,
pmin.int, rbind, rep.int, table
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Welcome to VanillaICE version 1.12.4
* MD5 sums
packaged installation of 'VanillaICE' as VanillaICE_1.12.4.zip
* DONE (VanillaICE)