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Package 285/419HostnameOS / ArchBUILDCHECKBUILD BIN
ontoCAT 1.0.0
Natalja Kurbatova
Snapshot Date: 2011-03-30 23:22:56 -0700 (Wed, 30 Mar 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/ontoCAT
Last Changed Rev: 50293 / Revision: 54281
Last Changed Date: 2010-10-17 22:34:23 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ ERROR ] skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: ontoCAT
Version: 1.0.0
Command: chmod a+r ontoCAT -R && E:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD build --keep-empty-dirs ontoCAT
StartedAt: 2011-03-31 04:49:42 -0700 (Thu, 31 Mar 2011)
EndedAt: 2011-03-31 04:50:34 -0700 (Thu, 31 Mar 2011)
EllapsedTime: 52.1 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

Warning: unknown option '--keep-empty-dirs'
* checking for file 'ontoCAT/DESCRIPTION' ... OK
* preparing 'ontoCAT':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: rJava

Error: processing vignette 'ontoCAT.Rnw' failed with diagnostics:
 chunk 7 (label=R.hide) 
Error in .jcall("RJavaTools", "Ljava/lang/Object;", "invokeMethod", cl,  : 
  java.lang.NullPointerException
Execution halted