GEOmetadb 1.10.0
Jack Zhu
| Snapshot Date: 2011-03-30 23:22:56 -0700 (Wed, 30 Mar 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/GEOmetadb | | Last Changed Rev: 50293 / Revision: 54281 | | Last Changed Date: 2010-10-17 22:34:23 -0700 (Sun, 17 Oct 2010) |
| lamb2 | Linux (openSUSE 11.2) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | [ ERROR ] | skipped | skipped |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
Warning: unknown option '--keep-empty-dirs'
* checking for file 'GEOmetadb/DESCRIPTION' ... OK
* preparing 'GEOmetadb':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: GEOquery
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Setting options('download.file.method'='curl')
Loading required package: RSQLite
Loading required package: DBI
Error: processing vignette 'GEOmetadb.Rnw' failed with diagnostics:
chunk 3
Error in gzfile(filename, "rb") : cannot open the connection
In addition: Warning messages:
1: In download.file("http://gbnci.abcc.ncifcrf.gov/geo/GEOmetadb.sqlite.gz", :
download had nonzero exit status
2: In gzfile(filename, "rb") :
cannot open compressed file 'D:/biocbld/bbs-2.7-bioc/meat/GEOmetadb/inst/doc/GEOmetadb.sqlite.gz', probable reason 'No such file or directory'
Execution halted