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Package 45/419HostnameOS / ArchBUILDCHECKBUILD BIN
BGmix 1.9.0
Alex Lewin
Snapshot Date: 2010-10-12 23:20:30 -0700 (Tue, 12 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/BGmix
Last Changed Rev: 49487 / Revision: 50145
Last Changed Date: 2010-09-19 23:17:35 -0700 (Sun, 19 Sep 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64 [ ERROR ] skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: BGmix
Version: 1.9.0
Command: chmod a+r BGmix -R && D:\biocbld\bbs-2.7-bioc\R\bin\R.exe CMD build BGmix
StartedAt: 2010-10-13 03:48:59 -0700 (Wed, 13 Oct 2010)
EndedAt: 2010-10-13 03:49:20 -0700 (Wed, 13 Oct 2010)
EllapsedTime: 21.1 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'BGmix/DESCRIPTION' ... OK
* preparing 'BGmix':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
[1] "These plots are designed for differential expression model."
[1] "These plots are designed for differential expression model."
[1] "No. DE genes for FDR<=5% is  148"
[1] "No. DE genes for FDR<=10% is  163"
[1] "No. DE genes for FDR<=5% is  148"
[1] "No. DE genes for FDR<=10% is  163"

Error: processing vignette 'BGmix.Rnw' failed with diagnostics:
 chunk 6 
Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,  : 
  scan() expected 'a real', got '-1.#IND'
Execution halted