sigPathway 1.14.0
Weil Lai
| Snapshot Date: 2009-12-13 23:30:35 -0800 (Sun, 13 Dec 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/sigPathway | | Last Changed Rev: 42684 / Revision: 43539 | | Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | [ OK ] | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'sigPathway/DESCRIPTION' ... OK
* preparing 'sigPathway':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* installing *source* package ‘sigPathway’ ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c calc_gene_set_internal.c -o calc_gene_set_internal.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c calc_gene_set_stat.c -o calc_gene_set_stat.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c calc_probe_stat.c -o calc_probe_stat.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c calc_weights.c -o calc_weights.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c matrix_fn.c -o matrix_fn.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c permute.c -o permute.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c shuffle.c -o shuffle.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c sigPathway.c -o sigPathway.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o sigPathway.so calc_gene_set_internal.o calc_gene_set_stat.o calc_probe_stat.o calc_weights.o matrix_fn.o permute.o shuffle.o sigPathway.o -L/home/biocbuild/bbs-2.5-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-2.5-bioc/R/lib -lRblas -lgfortran -lm -L/home/biocbuild/bbs-2.5-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
* DONE (sigPathway)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
file 'sigPathway/src/Makevars' had non-LF line endings
* checking for empty or unneeded directories
* building 'sigPathway_1.14.0.tar.gz'