Package: graph

Version: 1.24.1

Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD check --no-vignettes graph_1.24.1.tar.gz

StartedAt: 2009-12-14 05:15:19 -0800 (Mon, 14 Dec 2009)

EndedAt: 2009-12-14 05:16:12 -0800 (Mon, 14 Dec 2009)

EllapsedTime: 53.3 seconds

RetCode: 0

Status: WARNINGS

CheckDir: graph.Rcheck

Warnings: 1

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.5-bioc/meat/graph.Rcheck'
* using R version 2.10.0 (2009-10-26)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'graph/DESCRIPTION' ... OK
* this is package 'graph' version '1.24.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... WARNING
Subdirectory 'src' contains:
  BioC_graph.dll
These are unlikely file names for src files.
* checking whether package 'graph' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: graphRendering.Rd:21: Dropping empty section \keyword
prepare_Rd: graphRendering.Rd:10-12: Dropping empty section \details
prepare_Rd: graphRendering.Rd:14-16: Dropping empty section \seealso
prepare_Rd: graphRendering.Rd:18-20: Dropping empty section \examples
prepare_Rd: leaves.Rd:41: Dropping empty section \keyword
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  E:/biocbld/bbs-2.5-bioc/meat/graph.Rcheck/00check.log
for details

* install options are ' --no-html'

* installing *source* package 'graph' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O3 -Wall  -std=gnu99 -c graph.c -o graph.o
gcc -shared -s -o graph.dll tmp.def graph.o -Le:/biocbld/bbs-2.5-bioc/R/bin -lR
mv graph.dll BioC_graph.dll
  ... done
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (graph)