GLAD 2.6.0
Philippe Hupe
| Snapshot Date: 2009-12-13 23:30:35 -0800 (Sun, 13 Dec 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/GLAD | | Last Changed Rev: 42684 / Revision: 43539 | | Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'GLAD/DESCRIPTION' ... OK
* preparing 'GLAD':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* installing *source* package 'GLAD' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
making DLL ...
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c BkpInfo.cpp -o BkpInfo.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c HaarSeg.cpp -o HaarSeg.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c MoveBkp.cpp -o MoveBkp.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c OutliersGNL.cpp -o OutliersGNL.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c chrBreakpoints.cpp -o chrBreakpoints.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c cutree.cpp -o cutree.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c daglad.cpp -o daglad.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c distance.cpp -o distance.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c filterBkp.cpp -o filterBkp.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c findCluster.cpp -o findCluster.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c glad-utils.cpp -o glad-utils.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c hclust.cpp -o hclust.o
gcc -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O3 -Wall -std=gnu99 -c laws.c -o laws.o
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include" -Ie:/biocbld/bbs-2.5-bioc/R/src/include -IC:/gsl/include -O2 -Wall -c loopRemove.cpp -o loopRemove.o
g++ -shared -s -o GLAD.dll tmp.def BkpInfo.o HaarSeg.o MoveBkp.o OutliersGNL.o chrBreakpoints.o cutree.o daglad.o distance.o filterBkp.o findCluster.o glad-utils.o hclust.o laws.o loopRemove.o -LC:/gsl/bin -lgsl -lgslcblas -lm -Le:/biocbld/bbs-2.5-bioc/R/bin -lR
... done
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (GLAD)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'GLAD_2.6.0.tar.gz'