Package: CNVtools

Version: 1.40.2

Command: /home/biocbuild/bbs-2.5-bioc/R/bin/R CMD build CNVtools

StartedAt: 2009-12-14 02:46:08 -0800 (Mon, 14 Dec 2009)

EndedAt: 2009-12-14 02:46:50 -0800 (Mon, 14 Dec 2009)

EllapsedTime: 42.5 seconds

RetCode: 0

Status: OK

PackageFile: CNVtools_1.40.2.tar.gz

PackageFileSize: 995.5 KiB

* checking for file 'CNVtools/DESCRIPTION' ... OK
* preparing 'CNVtools':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package ‘CNVtools’ ...
** libs
g++ -I/home/biocbuild/bbs-2.5-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c fitmodel.cpp -o fitmodel.o
g++ -I/home/biocbuild/bbs-2.5-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c glm_test.cpp -o glm_test.o
g++ -I/home/biocbuild/bbs-2.5-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c mla.cpp -o mla.o
g++ -I/home/biocbuild/bbs-2.5-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c routine.cpp -o routine.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.5-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c zeroin.c -o zeroin.o
g++ -shared -L/usr/local/lib64 -o CNVtools.so fitmodel.o glm_test.o mla.o routine.o zeroin.o -L/home/biocbuild/bbs-2.5-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Loading required package: splines
** help
*** installing help indices
** building package indices ...
* DONE (CNVtools)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'CNVtools_1.40.2.tar.gz'