PCpheno 1.4.1
Nolwenn Le Meur
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/PCpheno | | Last Changed Rev: 35381 / Revision: 38965 | | Last Changed Date: 2008-11-17 12:23:39 -0800 (Mon, 17 Nov 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | [ OK ] | OK | OK |
* checking for file 'PCpheno/DESCRIPTION' ... OK
* preparing 'PCpheno':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'PCpheno' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: ScISI
Loading required package: apComplex
Loading required package: graph
Loading required package: RBGL
Loading required package: Rgraphviz
Loading required package: grid
Loading required package: org.Sc.sgd.db
Loading required package: AnnotationDbi
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: DBI
Loading required package: GO.db
Loading required package: GOstats
Loading required package: annotate
Loading required package: xtable
Attaching package: 'annotate'
The following object(s) are masked from package:Rgraphviz :
toFile
Loading required package: Category
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: RpsiXML
Loading required package: XML
Attaching package: 'XML'
The following object(s) are masked from package:graph :
addNode
Loading required package: hypergraph
Attaching package: 'hypergraph'
The following object(s) are masked from package:xtable :
label,
label<-
The following object(s) are masked from package:AnnotationDbi :
head,
tail
The following object(s) are masked from package:Rgraphviz :
head,
tail
The following object(s) are masked from package:utils :
head,
tail
Loading required package: SLGI
Loading required package: lattice
Loading required package: ppiStats
Loading required package: ppiData
Loading required package: RColorBrewer
Loading required package: KEGG.db
** help
>>> Building/Updating help pages for package 'PCpheno'
Formats: text html latex example
CoHyperGParams-class text html latex
CoHyperGResult-class text html latex example
Dudley text html latex example
Giaever text html latex example
HI text html latex example
KEGG2SCISI text html latex example
Kastenmayer text html latex example
Lesage text html latex example
Osterberg text html latex example
PCpheno.package text html latex
SGDphenoL text html latex example
YEASTOHNOLOG text html latex example
buildFDMat text html latex example
categoryToEntrezBuilder text html latex example
complexStatus text html latex example
deResult-class text html latex example
densityEstimate text html latex example
getDescr text html latex example
getFDgene text html latex example
graphTheory text html latex example
gtResult-class text html latex example
overlap text html latex example
plot text html latex example
ppiInteraction text html latex example
reduceM text html latex example
testResult-class text html latex
truncName text html latex example
** building package indices ...
* DONE (PCpheno)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'PCpheno_1.4.1.tar.gz'