BufferedMatrix 1.6.0
Benjamin Milo Bolstad
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/BufferedMatrix | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/BufferedMatrix.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'BufferedMatrix/DESCRIPTION' ... OK
* this is package 'BufferedMatrix' version '1.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'BufferedMatrix' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating BufferedMatrix-Ex.R ... OK
* checking examples ... OK
* checking tests ...
make[1]: Entering directory `/cygdrive/e/biocbld/bbs-2.3-bioc/meat/BufferedMatrix.Rcheck/tests'
Running 'Rcodetesting.R'
Running 'c_code_level_tests.R'
Running 'objectTesting.R'
Running 'rawCalltesting.R'
make[1]: Leaving directory `/cygdrive/e/biocbld/bbs-2.3-bioc/meat/BufferedMatrix.Rcheck/tests'
OK
* checking package vignettes in 'inst/doc' ... OK
* creating BufferedMatrix-manual.tex ... OK
* checking BufferedMatrix-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/BufferedMatrix.Rcheck
---------- Making package BufferedMatrix ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making RBufferedMatrix.d from RBufferedMatrix.c
making doubleBufferedMatrix.d from doubleBufferedMatrix.c
making doubleBufferedMatrix_C_tests.d from doubleBufferedMatrix_C_tests.c
making init_package.d from init_package.c
gcc -std=gnu99 -Ie:/biocbld/bbs-2.3-bioc/R/include -O3 -Wall -c RBufferedMatrix.c -o RBufferedMatrix.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.3-bioc/R/include -O3 -Wall -c doubleBufferedMatrix.c -o doubleBufferedMatrix.o
doubleBufferedMatrix.c:3327: warning: 'sort_double' defined but not used
gcc -std=gnu99 -Ie:/biocbld/bbs-2.3-bioc/R/include -O3 -Wall -c doubleBufferedMatrix_C_tests.c -o doubleBufferedMatrix_C_tests.o
gcc -std=gnu99 -Ie:/biocbld/bbs-2.3-bioc/R/include -O3 -Wall -c init_package.c -o init_package.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include -i BufferedMatrix_res.rc -o BufferedMatrix_res.o
gcc -std=gnu99 -shared -s -o BufferedMatrix.dll BufferedMatrix.def RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o BufferedMatrix_res.o -Le:/biocbld/bbs-2.3-bioc/R/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
preparing package BufferedMatrix for lazy loading
Creating a new generic function for "ncol" in "BufferedMatrix"
Creating a new generic function for "nrow" in "BufferedMatrix"
Creating a new generic function for "mean" in "BufferedMatrix"
Creating a new generic function for "as.matrix" in "BufferedMatrix"
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'BufferedMatrix'
Formats: text html latex example chm
BufferedMatrix-class text html latex chm
as.BufferedMatrix text html latex chm
Note: ignoring empty \keyword entries in file 'createBufferedMatrix.Rd'
Note: removing empty section \value in file 'createBufferedMatrix.Rd'
Note: removing empty section \details in file 'createBufferedMatrix.Rd'
Note: removing empty section \references in file 'createBufferedMatrix.Rd'
Note: removing empty section \examples in file 'createBufferedMatrix.Rd'
Note: removing empty section \seealso in file 'createBufferedMatrix.Rd'
Note: ignoring empty \keyword entries in file 'createBufferedMatrix.Rd'
Note: removing empty section \value in file 'createBufferedMatrix.Rd'
Note: removing empty section \details in file 'createBufferedMatrix.Rd'
Note: removing empty section \references in file 'createBufferedMatrix.Rd'
Note: removing empty section \examples in file 'createBufferedMatrix.Rd'
Note: removing empty section \seealso in file 'createBufferedMatrix.Rd'
createBufferedMatrix text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\BufferedMatrix.Rcheck\00_pkg_src\BufferedMatrix\chm\BufferedMatrix.chm
Compile time: 0 minutes, 0 seconds
4 Topics
105 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\BufferedMatrix.Rcheck\00_pkg_src\BufferedMatrix\chm\BufferedMatrix.chm, 23,551 bytes
Compression decreased file by 30,853 bytes.
adding MD5 sums
* DONE (BufferedMatrix)